Job Description P0A9W3 Confidence 96.82% Date Thu Jan 5 11:11:33 GMT 2012 Rank 197 Aligned Residues 143 % Identity 15% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370							.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		I	P	K	G	A	I	V	G	I	I	G	P	N	G	A	G	K	S	T	L	F	R	M	I	S	.	.	.	.	.	.	G	Q	E	Q	P	D	S	G	T	I	T	L	G	E	T	V	K	L	A	S	V	D	Q	F	R	D	S	M	D	N	S	K	T	V	W	E	E	V	S	G	G	L	D	I	M	K	I	G	N
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	E	G	T	F
Template Known Secondary structure				S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																															.	220	.	.	.	.
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.					.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460			.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.										.	.	.	480	.	.	.	.
Predicted Secondary structure																											.	.	.	.																	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.																	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	M	P	S	R	A	Y	V	G	R	F	N	F	K	G	V	D	Q	G	K	R	V	G	E	.	.	.	.	L	S	G	G	E	R	G	R	L	H	L	A	K	L	L	Q	.	.	V	G	G	N	M	L	L	L	D	E	P	T	N	D	L	D	.	.	.	.	.	.	.	.	.	I	E	T	L	R	A	L	E
Query Conservation																											.	.	.	.																	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.																	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	V	R	L	V	S	I	A	Q	R	F	G	L	D	P	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q
Template Known Secondary structure			G	G	G	G							T								G	G	G								S	T	T									T							S										T	T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		N	A	L	L	E	F	P	G	C	A	M	V	I	S	H	.	D	R	W	F	L	D	R	I	A	T	H	I	L	D	Y	Q	D	E	G
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	V	G	G	N	I	M	A	H	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																											S									S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions