Job Description P0A9W3 Confidence 96.94% Date Thu Jan 5 11:11:33 GMT 2012 Rank 171 Aligned Residues 104 % Identity 20% Template c1sxjA_ PDB info
PDB header: replicationChain: A: PDB Molecule: activator 1 95 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
351 . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430
Predicted Secondary structure
Query SS confidence
Query Sequence
I V G I I G P N G A G K S T L F R M I S G Q E Q P D S G T I T L G E T V K L A S V D Q F R D S M D N S K T V W E E V S G G L D I M K I G N T E M P S R A Y V G R
Query Conservation
Alig confidence
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Sequence
A A M L Y G P P G I G K T T A A H L V A Q .
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
E L G Y D I L E Q N A S D V R S K T L L N A
Template Known Secondary structure
S T T S S . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T T T T S
Template Predicted Secondary structure
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template SS confidence
348 . 350 . . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390
431 . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490 . . . . . . . . . 500
Predicted Secondary structure
. .
Query SS confidence
.
.
Query Sequence
F N F K G V D Q G K R V G E L S G G E R G R L H L A K L L Q V G G N M L L L D E P .
.
T N D L D I E T L R A L E N A L L E F P G C A M V I S H D
Query Conservation
. .
Alig confidence
. . . . . . . . . . .
Template Conservation
. . . . . . . . .
Template Sequence
G V K N A L D N M S V V G Y F K H Q N L N .
.
.
.
.
.
.
.
.
G K H F V I I M D E V D G M S G G D R G G V G Q L A Q F C R K T S T P L I L I C N E
Template Known Secondary structure
T G G G G T T S T T T T T S S . . . . . . . . . T T S S G G G T T S T T S S S
Template Predicted Secondary structure
. . . . . . . . .
Template SS confidence
391 . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420 . . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
