 |
Job Description | P76483 | Confidence | 18.54% | Date | Thu Jan 5 12:23:26 GMT 2012 |
Rank | 5 | Aligned Residues | 66 |
% Identity | 12% | Template | d1e85a_ |
SCOP info | Four-helical up-and-down bundle
| Cytochromes
| Cytochrome c'-like
|
Resolution | 1.35 |
|
 |
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | W | N | Q | E | L | A | A | T | I | D | R | L | E | S | L | D | R | N | E | L | R | K | Q | F | S | I | K | R | L | N | E | M | E | I | Y | P | G | V | T | F | S | E | E | L | E | G | Q | L | F | A | S | I | M | L | D | M | E | K | L | I | S | A | Y | R | R | M | L | R | Q | G | N |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |
| . |   |   |   |   |   |   |
| . |
|   |
|
|   |   |   |   |
|   |
|   |
|
|   |   |   |   |   | . | . | . | . |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |
|
|
Template Sequence |   |
Y | D | A | A | Q | I | K | A | N | V | E | V | L | K | T | L | S | . |
A | L | P | W | A | A | F | . |
G | P | G | T | E | G | G | D | A | R | P | E | I | W | S | D | A | A | S | . |
. |
. |
. |
F | K | Q | K | Q | Q | A | F | Q | D | N | I | V | K | L | S | A | A | A | D | A | G | D |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | S | S | G | G | G | S | . |
| T | T |
|
|
| T | T | B |
| T |  |  |  |  | T |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
|
|
|
. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|