Job Description P76483 Confidence 5.44% Date Thu Jan 5 12:23:26 GMT 2012 Rank 49 Aligned Residues 60 % Identity 15% Template c3n1bA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 54; PDBTitle: c-terminal domain of vps54 subunit of the garp complex Resolution 2.40 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	W	N	Q	E	L	A	A	T	I	D	R	L	E	S	L	D	R	N	E	L	R	K	Q	F	S	I	K	R	L	N	E	M	E	I	Y	P	G	V	T	F	S	E	E	L	E	G	Q	L	F	A	S	I	M	L	D	M	E	K	L	I	S	A
Query Conservation
Alig confidence																										.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		D	L	L	P	E	E	Q	T	Q	X	L	F	L	R	I	N	A	S	Y	K	L	H	L	K	.	.	.	.	.	K	Q	L	S	H	L	N	V	I	N	D	G	G	P	Q	N	G	L	V	T	A	D	V	A	F	Y	T	G	N	L	Q	A	L	K	G	L
Template Known Secondary structure		T	T	S																						.	.	.	.	.						T	T			S	S	S																					S	T	T
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		903	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.						.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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