Job Description P64636 Confidence 98.77% Date Thu Jan 5 12:10:04 GMT 2012 Rank 98 Aligned Residues 125 % Identity 26% Template d1yj5a1 SCOP info HAD-like HAD-like phosphatase domain of polynucleotide kinase Resolution 2.80

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	V	L	L	D	M	D	G	T	L	L	D	L	A	F	D	N	Y	F	W	Q	K	L	V	P	E	T	W	G	A	K	N	G	V	T	P	Q	E	A	M	E	Y	M	R	Q	Q	Y	H	D	V	Q	H	T	L	N	W	Y	C	L	D	Y	W	S	E	Q	L	G	L	D	I	C	A	M	T	T	E	M	G	P
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	A	A	F	D	L	D	G	T	L	I	T	T	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	V	F	P	T	S	P	S	D
Template Known Secondary structure								S	B	T	T	T				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S		S	S	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																																																							.	.	.	.	.	.	.	.	.	190
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.									.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																														.	.	.	.	.	.	.	.													.	.
Query SS confidence																														.	.	.	.	.	.	.	.													.	.
Query Sequence		R	A	V	L	R	E	D	T	I	P	F	L	E	A	L	K	A	S	G	K	Q	R	I	L	L	T	N	A	.	.	.	.	.	.	.	.	H	P	H	N	L	A	V	K	L	E	H	T	.	.	G	L	D	A	H	L	D	L	L	L	S	T	H	T	F	G	Y	P	K	E	D	Q	R	L	W	H	A	V	A	E
Query Conservation																														.	.	.	.	.	.	.	.													.	.
Alig confidence																														.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		W	R	I	L	Y	P	E	I	P	K	K	L	Q	E	L	A	A	E	G	Y	K	L	V	I	F	T	N	Q	X	G	I	G	R	G	K	L	P	A	E	V	F	K	G	K	V	E	A	V	L	E	K	L	G	V	P	F	Q	V	L	V	A	T	H	A	G	L	N	R	K	P	V	S	G	X	W	D	H	L	Q	E
Template Known Secondary structure					S		T	T												T															T	S	S																	T	S									S	S	S	S	S	S	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		161	.	.					.	.	.	.	.	.	170	.	.	.	.																		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	G	.	.	.	.	L	K	A	E	R	T	L	F	I	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	I	L	D	A	A	A	Q	F	G	I	R	Y
Query Conservation					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	A	N	E	G	I	P	I	S	V	E	D	S	V	F	V	G	D	A	A	G	R	L	A	N	W	A	P	G	R	K	K	K	D	F	S	C	A	D	R	L	F	A	L	N	V	G	L	P	F
Template Known Secondary structure		T	S	S	S	S					G	G	G						S				B		T	T	S	B	T	T	B		S			S												T
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions