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Job DescriptionP64636
Confidence98.28%DateThu Jan 5 12:10:04 GMT 2012
Rank114Aligned Residues134
% Identity25%Templatec3pgvB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
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Query Sequence  VDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNGVTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMG
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Template Sequence  YQVVASDLDGTLLSPDH. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Query Sequence  PRAVLREDTIPFLEALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKE. . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . FLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYXITSNGARVHDSDGQQIFAHNLDRDIAADLFEIV
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Template Sequence  RNDPKIVTNVYREDEWYXNRHRPVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAXNARWGDRVNVSFSTLTCLEV
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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
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Query Sequence  . . . . . . DQRLWHAVAEATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLND
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Template Sequence  XAGGVSKGHALEAVAKXLGYTLSDCIAFGDGXNDAEXLSXAG. . . . KGCIXANAHQRLKDLHPELEVIG
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   185....190.........200.........210.........220...... ...230.........240.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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