Job Description P64636 Confidence 99.28% Date Thu Jan 5 12:10:04 GMT 2012 Rank 83 Aligned Residues 201 % Identity 16% Template c3fvvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of the protein with unknown function from2 bordetella pertussis tohama i Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		D	T	V	L	L	D	M	D	G	T	L	L	D	L	A	F	D	N	Y	F	W	Q	K	L	V	P	E	.	.	.	.	.	T	W	G	A	K	N	G	V	T	P	Q	E	A	M	E	Y	M	R	Q	Q	Y	H	D	V	Q	H	T	L	N	W	Y	C	L	D	Y	W	S	E	Q	L	G	L	D	I	C	A	M	T
Query Conservation																													.	.	.	.	.
Alig confidence																													.	.	.	.	.
Template Conservation
Template Sequence		R	L	A	L	F	D	L	D	H	T	L	L	P	L	D	S	D	Y	Q	W	A	D	F	L	A	R	T	G	R	A	G	D	P	A	E	A	R	R	R	N	D	D	L	M	E	R	Y	N	R	G	E	L	T	A	E	Q	A	A	E	F	M	L	G	L	L	A	A	H	S	P	V	E	L	A	A	W	H	E	E	F
Template Known Secondary structure									B	T	T	T	B	S	S													T	T	S	S	S	S																		T		S															T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.														.	.	.	.	.	150	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	M	G	P	R	A	V	L	R	E	D	T	I	P	F	L	E	A	L	K	A	S	G	K	Q	R	I	L	L	T	N	A	H	P	H	N	L	A	V	K	L	E	H	T	G	L	D	A	H	L	D	L	L	L	S	T	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	Y	P	K	E	D	Q
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	D	V	I	R	P	S	L	T	V	Q	A	V	D	V	V	R	G	H	L	A	A	G	D	L	C	A	L	V	T	A	T	N	S	F	V	T	A	P	I	A	R	A	F	G	V	Q	H	L	I	A	T	D	P	E	Y	R	D	G	R	Y	T	G	R	I	E	G	T	P	S	F	R	E	G	K	V	V	R	V
Template Known Secondary structure					T	T	G	G	G															T	T								S	S												T	T													T	T								S	S		S	S	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	W	H	A	V	A	E	A	T	G	L	K	A	E	R	T	L	F	I	D	D	S	E	A	I	L	D	A	A	A	Q	F	G	I	R	Y	C	L	G	V	T	N	P	D	S	G	I	A	E	K	Q	Y	Q	R	H	P	S	L	N	D	Y
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		N	Q	W	L	A	G	M	G	L	A	L	G	D	F	A	E	S	Y	F	Y	S	D	S	V	N	D	V	P	L	L	E	A	V	T	R	P	I	A	A	.	.	.	N	P	S	P	G	L	R	E	I	A	Q	A	R	G	W	Q	V	I	D	L
Template Known Secondary structure								T	T			G	G	G	S	S									G	G	G							S	S						.	.	.	S													T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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