Job Description P64636 Confidence 87.27% Date Thu Jan 5 12:10:04 GMT 2012 Rank 157 Aligned Residues 79 % Identity 14% Template c3ef1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase Resolution 2.15 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		A	V	L	R	E	D	T	I	P	F	L	E	A	L	K	A	S	G	K	Q	R	I	L	L	T	N	A	H	P	H	N	L	A	V	K	L	E	H	T	G	L	D	A	H	L	D	L	.	.	L	L	S	T	H	T	F	G	Y	P	K	E	D	Q	R	L	W	H	A	V	A	E	A	T	G	L	K	A	E	R	T
Query Conservation																																																	.	.
Alig confidence																.																																	.	.														.	.	.	.	.
Template Conservation																.																																																.	.	.	.	.
Template Sequence		I	K	F	R	P	G	L	A	Q	F	L	Q	K	I	.	S	E	L	Y	E	L	H	I	Y	T	M	G	T	K	A	Y	A	K	E	V	A	K	I	I	D	P	T	G	K	L	F	Q	D	R	V	L	S	R	D	D	S	G	S	L	A	Q	K	.	.	.	.	.	S	L	R	R	L	F	P	C	D	T	S	M	V
Template Known Secondary structure						T	T									.	T	T	T								S	S														T	T	S	T	T	T	T	T					T	T	T	S	S		S	S			.	.	.	.	.		G	G	G	T		S	S			T	T
Template Predicted Secondary structure																.																																																.	.	.	.	.
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280						.	.	.	.	.	.	.	.	.	290	.	.	.
		170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	I	D	D	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	I	D	D	R	G
Template Known Secondary structure						S		S
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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