Job Description P64636 Confidence 99.45% Date Thu Jan 5 12:10:04 GMT 2012 Rank 80 Aligned Residues 181 % Identity 14% Template c2i7dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+ Resolution 1.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		V	L	L	D	M	D	G	T	L	L	D	L	A	F	D	N	Y	F	W	Q	K	L	V	P	E	T	W	G	A	K	N	G	V	T	P	Q	E	A	M	E	Y	M	R	Q	Q	Y	H	D	V	Q	H	T	L	N	W	Y	C	L	D	Y	W	S	E	Q	L	G	L	D	I	C	A	M	T	T	E	.	.	M	G	P
Query Conservation																																																																													.	.
Alig confidence																							.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation																							.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	V	D	M	D	G	V	L	A	D	F	E	A	G	L	L	R	G	F	R	.	.	.	R	R	F	P	E	E	P	H	V	P	L	E	Q	R	R	G	F	L	A	R	E	Q	Y	R	A	L	R	P	D	.	.	.	.	.	.	.	.	.	.	.	L	A	D	K	V	A	S	V	Y	E	A	P	G	F	F	L
Template Known Secondary structure						S	B	T	T	T	B												.	.	.			S	T	T	S					G	G	G			S	S											T	T	.	.	.	.	.	.	.	.	.	.	.										T	S	T	T	T	T	T
Template Predicted Secondary structure																							.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.																									.
Query SS confidence																			.																									.
Query Sequence		R	A	V	L	R	E	D	T	I	P	F	L	E	A	L	K	A	.	S	G	K	Q	R	I	L	L	T	N	A	H	P	H	N	L	A	V	K	L	E	H	T	G	.	L	D	A	H	L	D	L	L	L	S	T	H	T	F	G	Y	P	K	E	D	Q	R	L	W	H	A	V	A	E	A	T	G	L	K	A	E	R
Query Conservation																			.																									.
Alig confidence																			.																									.						.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		D	L	E	P	I	P	G	A	L	D	A	V	R	E	M	N	D	L	P	D	T	Q	V	F	I	C	T	S	P	L	L	K	Y	H	H	C	V	G	E	K	Y	R	W	V	E	Q	H	L	.	.	.	.	.	.	.	.	.	.	.	G	P	Q	F	V	E	R	I	I	L	T	R	D	K	T	V	V	L	G	D	.
Template Known Secondary structure		T			B		T	T											S	T	T											S	S		T	T	T													.	.	.	.	.	.	.	.	.	.	.						T	T					S		G	G	G	S			S	.
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120												.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	F	I	D	D	S	E	A	I	L	D	A	A	A	Q	F	G	I	R	Y	C	L	G	V	T	N	P	D	S	G	I	A	E	K	Q	Y	Q	R	H	P	S	L	N	D	Y	R	R	L	I	P	S	L	M
Query Conservation
Alig confidence		.																								.	.
Template Conservation		.																								.	.
Template Sequence		.	L	L	I	D	D	K	D	T	V	R	G	Q	E	E	T	P	S	W	E	H	I	L	F	.	.	T	C	C	H	N	R	H	L	V	L	P	P	T	R	R	R	L	L	S	W	S	D	N	W	R	E	I	L
Template Known Secondary structure		.						S	S				S	S		S	S		S	S						.	.			G	G	G	T	T					T	T	S						T	T	S
Template Predicted Secondary structure		.																								.	.
Template SS confidence
			141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions