Job Description P0AFZ7 Confidence 1.14% Date Thu Jan 5 11:27:41 GMT 2012 Rank 100 Aligned Residues 77 % Identity 8% Template d1fftb2 SCOP info Transmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Resolution 3.50

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Show / Hide Conservation and Alignment quality

		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.								.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		F	S	T	H	D	A	S	I	G	Y	F	D	S	P	T	I	N	T	I	I	A	I	F	L	L	I	S	G	C	N	Y	G	L	H	F	S	L	L	S	G	R	S	L	K	V	.	.	.	.	.	.	.	Y	W	R	D	P	E	F	R	M	F	I	G	V	Q	F	T	L	V	V	I	C	T	L	V	L	W	F	H
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	P	K	G	Q	I	G	L	E	Q	R	S	L	I	L	T	A	F	G	L	M	L	I	V	V	I	P	A	I	L	M	A	V	G	F	A	W	K	Y	R	A	S	N	K	D	A	K	Y	S	P	N	W	S	H	S	N	K	V	E	A	V	V	W	T	V	P	I	L	I	I	I	F	L	A	V	L	T	W	K
Template Known Secondary structure		S	S			S																	T	T	T	T	T	T								T	T	T	T	T	T	T	T	S	T	T	T		S	S								S						T	T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		296	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	H	A
Template Known Secondary structure			S		T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions