Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFZ7
Confidence1.28%DateThu Jan 5 11:27:41 GMT 2012
Rank78Aligned Residues15
% Identity53%Templatec2ariA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:envelope polyprotein gp160; PDBTitle: solution structure of micelle-bound fusion domain of hiv-12 gp41
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   338.340.... .....350..
Predicted Secondary structure 
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Query Sequence  LCSAFIG. . GCAGSTGG
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Template Sequence  IGALFLGFLGAAGSTMG
Template Known Secondary structure  TT
Template Predicted Secondary structure 






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   5....10.........20.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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