Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFZ7
Confidence2.56%DateThu Jan 5 11:27:41 GMT 2012
Rank34Aligned Residues24
% Identity21%Templatec1lj2D_
PDB info PDB header:viral protein/ translationChain: D: PDB Molecule:eukaryotic protein synthesis initiation factor; PDBTitle: recognition of eif4g by rotavirus nsp3 reveals a basis for2 mrna circularization
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   371........380.........390....
Predicted Secondary structure 












Query SS confidence 























Query Sequence  KRLVHPNAVYSIKLGNRALPERIL
Query Conservation       
  
       
 
    
Alig confidence 























Template Conservation 




 









 






Template Sequence  KRERKTIRIRDPNQGGKDITEEIM
Template Known Secondary structure 








TTTTS
Template Predicted Secondary structure 











Template SS confidence 























   134.....140.........150.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions