Job Description P77265 Confidence 99.81% Date Thu Jan 5 12:26:59 GMT 2012 Rank 63 Aligned Residues 274 % Identity 20% Template d1pf4a2 SCOP info ABC transporter transmembrane region ABC transporter transmembrane region ABC transporter transmembrane region Resolution 3.80

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	F	A	Q	L	S	W	Y	F	R	R	E	W	R	R	Y	L	G	A	V	A	L	L	V	I	I	A	M	L	Q	L	V	P	P	K	V	V	G	I	V	V	D	G	V	T	E	Q	H	F	T	T	G	Q	I	L	M	W	I	A	T	M	V	L	I	A	V	V	V	Y	L	L	R	Y	V	W	R	V	L	L
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		Q	T	F	K	R	L	W	T	Y	I	R	L	Y	K	A	G	L	V	V	S	T	I	A	L	V	I	N	A	A	A	D	T	Y	M	I	S	L	L	K	P	L	L	D	E	G	F	G	N	A	.	E	S	N	F	L	R	I	L	P	F	M	I	L	G	L	M	F	V	R	G	L	S	G	F	A	S	S	Y	C	L
Template Known Secondary structure			S	T	T							T	S		S	S																											T	T	S	S		S			.			S
Template Predicted Secondary structure																																																			.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	A	S	Y	Q	L	A	V	E	L	R	E	D	Y	Y	R	Q	L	S	R	Q	H	P	E	F	Y	L	R	H	R	T	G	D	L	M	A	R	A	T	N	D	V	D	R	V	V	F	A	A	G	E	G	V	L	T	L	V	D	S	L	V	M	G	C	A	V	L	I	M	M	S	T	Q	I	S	W	Q	L	T
Query Conservation
Alig confidence																																																																								.
Template Conservation																																																																								.
Template Sequence		S	W	V	S	G	N	V	V	M	Q	M	R	R	R	L	F	N	H	F	M	H	M	P	V	R	F	F	D	Q	E	S	T	G	G	L	L	S	R	I	T	Y	D	S	E	Q	V	A	G	A	T	S	R	A	L	V	S	I	V	R	E	G	A	S	I	I	G	L	L	T	L	.	M	F	W	N	S	W	Q	L	S
Template Known Secondary structure		T	T	T	G	G	G											T	T	T		S	S								T	T											G	G	G																T	T					G	G	G	G	G	.	G	S				S		T
Template Predicted Secondary structure																																																																								.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	L	L	P	M	P	V	M	A	I	M	I	K	R	N	G	D	A	L	H	E	R	F	K	L	A	Q	A	A	F	S	S	L	N	D	R	T	Q	E	S	L	T	S	I	R	M	I	K	A	F	G	L	E	D	R	Q	S	A	L	F	A	A	D	A	E	D	T	G	K	K	N	M	R	V	A	R	I	D
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	L	I	V	V	A	P	V	V	A	F	A	I	S	F	V	S	K	R	F	R	K	I	S	R	N	M	Q	T	A	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	Q	Q	T	M	K	L	V	S	A	Q
Template Known Secondary structure					G	G	G								T	T	G	G	G	G												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											G	G
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																																				.	.	.	.	.	.	.	.	210	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	D	P	T	I	Y	I	A	I	G	M	A	N	L	L	A	I	G	G	G	S	W	M	V	V	Q	G	S	L	T	L	G	Q	L	T	S	F	M	M	Y	L	G	L	M	I	W	P	M	L	A	L	A	W	M	F	N	I	V	E	R	G	S	A	A	Y	S	R	I	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	A	D	P	V	I	Q	M	I	A	S	L	A	L	F	A	V	L	F	L	A	S	V	D	S	I	R	A	E	L	T	P	G	T	F	T	V	V	F	S	A	M	F	G	L	M	R	P	L	K	A	L	T	S	V	T	S	E	F	Q	R	G	M	A	A	C	Q	T	L	F
Template Known Secondary structure		G	G										T	T							G	G	G	G	T	S	S															G	G	G	G	G	G	T	T	T	T	T	G	G	G	G	G	S	S							T
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions