Return to main results Retrieve Phyre Job Id

Job DescriptionP77265
Confidence94.56%DateThu Jan 5 12:26:59 GMT 2012
Rank195Aligned Residues103
% Identity19%Templatec3zvmA_
PDB info PDB header:hydrolase/transferase/dnaChain: A: PDB Molecule:bifunctional polynucleotide phosphatase/kinase; PDBTitle: the structural basis for substrate recognition by mammalian2 polynucleotide kinase 3' phosphatase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360.........370.........380.........390.........400.........410.........420.........430...
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Query Sequence  NVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALG
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Template Sequence  SSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSA. . . . GYVHVNRDTLGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TS
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TTSSTGGG....T

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   356...360.........370.........380........ .390.........400
 
   434.....440.........450.........460.........470.........480.........490.........500.........510...
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Query Sequence  CPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WQRCVSSCQAALRQGKRVVIDNT. . NPDVPSRARYIQ
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   401........410.........420... ......430.....
 
   514.....520.........530......
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Query Sequence  NLRQWGQGRTVIISAHRLSALTE
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Template Sequence  CAKDAGVPCRCFNFCATIEQARH
Template Known Secondary structure  T




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   436...440.........450........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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