Job Description P77265 Confidence 96.63% Date Thu Jan 5 12:26:59 GMT 2012 Rank 105 Aligned Residues 150 % Identity 19% Template c3ldaA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad51; PDBTitle: yeast rad51 h352y filament interface mutant Resolution 2.50 Å

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.							.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		L	K	P	G	Q	M	L	G	I	C	G	P	T	G	S	G	K	S	T	L	L	S	L	I	Q	.	.	.	.	.	.	R	H	F	D	V	S	E	G	D	I	R	F	H	D	I	P	L	T	K	L	Q	L	D	S	W	R	S	R	L	A	V	V	S	Q	T	P	F	L	F	S	D	T	V	A	N	N	I	A	L
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																	.													.	.	.	.
Template Conservation																																																	.													.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	.	G	T	F	R	P	V	R	L	V	S	I	A	.	.	.	.	Q	R	F	G	L	D	P	D	D	A	L	N	N	V	A	Y
Template Known Secondary structure				T	T	S							S	T	T	S	S												T	T	S		G	G	G	T			S	S							S	S	.	S												.	.	.	.			T	T									T
Template Predicted Secondary structure																																																	.													.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		G	C	P	N	A	T	Q	Q	E	I	E	H	V	A	R	L	A	S	V	H	D	D	I	L	R	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	M	L	S	G	G	Q	K	Q	R	I	S	I	A	R	A	L	L	V	N	A	E	I	L	I	L	D	D	A	L	S	A	V	D	G	R	T	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.																					.	.	.	.
Template Conservation					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		A	R	A	.	Y	N	A	D	H	Q	L	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	A	Q	M	M	S	E	.	.	.	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	G	E	L	S	A	R	Q	M
Template Known Secondary structure					.		S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	S									T	G	G	G	G
Template Predicted Secondary structure					.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		250	.	.		.	.	.	.	.	.	.	260	.	.																															.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
				509	510	.	.	.	.	.	.	.	.	.	520			.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure		.	.													.	.
Query SS confidence		.	.													.	.
Query Sequence		.	.	H	Q	I	L	H	N	L	R	Q	W	G	Q	.	.	G	R	T	V	I	I	S	A	H	R	L	S	A	L	T	E	A	S	E	I	I	V	M	Q	H	G	H
Query Conservation		.	.													.	.
Alig confidence		.	.													.	.
Template Conservation
Template Sequence		H	L	A	K	F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	V	N	I	M	A	Y	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																																			S									S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions