Job Description P77265 Confidence 94.21% Date Thu Jan 5 12:26:59 GMT 2012 Rank 217 Aligned Residues 193 % Identity 15% Template c3k1jA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent protease lon; PDBTitle: crystal structure of lon protease from thermococcus onnurineus na1 Resolution 2.00 Å

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		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	P	G	Q	M	L	G	I	C	G	P	T	G	S	G	K	S	T	L	L	S	L	I	Q	R	H	F	D	V	S	E	G	D	I	R	F	H	D	I	P	L	T	K	L	Q	L	D	S	W	R	S	R	L	A	V	V	S	Q	T	P	F	L	F	S	D	T	V	A	N	N	I	A	L	G	C	P	N	A	T
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	N	Q	K	R	H	V	L	L	I	G	E	P	G	T	G	K	S	M	L	G	Q	A	M	A	E	L	L	P	T	E	T	L	E	D	I	L	V	F	P	N	P	E	D	.	.	.	.	.	.	.	E	N	M	P	R	I	K	T	V	P	A	C	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T									T	T	S	S											T	S			S	S										T	T		.	.	.	.	.	.	.	T	T	S								T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.																														.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	E	I	E	H	V	A	R	L	A	S	V	H	D	D	I	L	R	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	S	G	G	Q	K	Q	R	I	S	I	A	R	A	L	L	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation		.																																																																							.	.	.	.	.	.	.	.
Template Sequence		.	R	R	I	V	E	K	Y	R	E	K	A	K	S	Q	E	S	V	L	V	P	K	L	L	V	D	N	C	G	R	T	K	A	P	F	I	D	A	T	G	A	H	A	G	A	L	L	G	D	V	R	H	D	P	F	L	G	T	P	A	H	E	R	V	E	P	G	M	I	H	R	.	.	.	.	.	.	.	.	A
Template Known Secondary structure		.															T												T	T		S	S							T	T																				G	G	G	G									.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.																																																																							.	.	.	.	.	.	.	.
Template SS confidence
			115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.									.
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		N	A	E	I	L	I	L	D	D	A	L	S	A	V	D	G	R	T	E	H	Q	I	L	H	N	L	R	Q	W	G	Q	G	R	T	V	I	I	S	A	H	R	L	S	A	L	T	E	A	S	E	I	I	V	M	Q	.	H	G	H	I	A	Q	R	G	N	H	D	V	L	A	Q	Q	S	G	W	Y	R	D	M	Y
Query Conservation																																																									.
Alig confidence														.																.	.	.	.																								.
Template Conservation														.																.	.	.	.
Template Sequence		H	K	G	V	L	F	I	D	E	I	A	T	.	L	S	L	K	M	Q	Q	S	L	L	T	A	M	Q	E	.	.	.	.	K	K	F	P	I	T	G	Q	S	E	M	S	S	G	A	M	V	R	T	E	P	V	P	C	D	F	V	L	V	A	A	G	N	L	D	T	V	D	K	M	H	P	A	L	R	S	R	I
Template Known Secondary structure		T	T	S					T	T	G	G	G	.	S															.	.	.	.	S					B		S		T	T	S	G	G	G	G		B		S																				S
Template Predicted Secondary structure														.																.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.					.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	Q	Q	L	E	A	A	L	D	D	A	P	E	N	R	E	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	Y	G	Y	E	V	Y	M	R	T	T	M	P	D	T	I	E	N
Template Known Secondary structure					S							S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions