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Job DescriptionP77265
Confidence100.00%DateThu Jan 5 12:26:59 GMT 2012
Rank18Aligned Residues229
% Identity30%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340.........350.........360.........370.........380.........390.........400........
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Query Sequence  PEGRGELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSW
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Template Sequence  WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQW
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TT

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   1204.....1210.........1220.........1230.........1240.........1250.........1260. ........1270.........1280..
 
   409410.........420.........430.........440.........450.........460.........470.........480........
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Query Sequence  RSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALL
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Template Sequence  RKAFGVIPQKVFIFSGTFRKNLDPNAA. HSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVL
Template Known Secondary structure  GGGS





SSB
TTS
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TTTT
TTTGGGSTTGGG
B

TTTTTS
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   1283......1290.........1300......... 1310.........1320.........1330.........1340.........1350.........1360.
 
   489490.........500.........510.........520.........530.... .....540.........550.........560
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Query Sequence  VNAEILILDDALSAVDGRTEHQILHNLRQWGQGRTVIISAHRLSAL. TEASEIIVMQHGHIAQRGNHDVLAQQ
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Template Sequence  SKAKILLLDEPSAHLDPVTYQIIRRTLKQA. FADCTVILCEARIEAMLECDQFLVIEENKVRQYDSILELYHY
Template Known Secondary structure  TT

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   1362.......1370.........1380.........1390. ........1400.........1410.........1420.........1430...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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