Job Description P77265 Confidence 90.87% Date Thu Jan 5 12:26:59 GMT 2012 Rank 402 Aligned Residues 155 % Identity 13% Template c3exaD_ PDB info PDB header:transferase Chain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41. Resolution 2.30 Å

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400																															.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	Q	M	L	G	I	C	G	P	T	G	S	G	K	S	T	L	L	S	L	I	Q	R	H	F	D	V	S	E	G	D	I	R	F	H	D	I	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	L	Q	L	D	S	W	R	S
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.
Template Sequence		K	E	K	L	V	A	I	V	G	P	T	A	V	G	K	T	K	T	S	V	X	L	A	K	R	L	N	.	.	G	E	V	I	S	G	D	S	X	Q	V	Y	R	G	X	D	I	G	T	A	K	I	T	A	E	E	X	D	G	V	P	H	H	L	I	D	I	K	D	P	S	E	S	F	S	V	A	D	F	Q	D
Template Known Secondary structure												T	T	S	S											T	T	T	.	.								T	T	T	T	B	T	T			T	T	T	T								T	T					S	S	S		B		T	T	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.								.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.				.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.									.	.													.	.	.
Query SS confidence										.	.	.	.	.	.	.									.	.													.	.	.
Query Sequence		R	L	A	V	V	S	Q	T	.	.	.	.	.	.	.	P	F	L	F	S	D	T	V	.	.	A	N	N	I	A	L	G	C	P	N	A	T	.	.	.	Q	Q	E	I	E	H	V	A	R	L	A	S	V	H	D	D	I	L	R	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	M	L	S	G	G	Q	K
Query Conservation										.	.	.	.	.	.	.									.	.													.	.	.
Alig confidence										.	.	.	.	.	.	.									.	.													.	.	.
Template Conservation
Template Sequence		L	A	T	P	L	I	T	E	I	H	E	R	G	R	L	P	F	L	V	G	G	T	G	L	Y	V	N	A	V	I	H	Q	F	N	L	G	D	I	R	A	D	E	D	Y	R	H	E	L	E	A	F	V	N	S	Y	G	V	Q	A	L	H	D	K	L	S	K	I	D	P	K	A	A	A	A	I	H	P	N	N	Y
Template Known Secondary structure													T	T																		T	T																							S											T	S						T	T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		479	480	.	.	.	.	.	.	.	.	.							490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		Q	R	I	S	I	A	R	A	L	L	V	.	.	.	.	.	.	N	A	E	I	L	I	L	D	D	A	L	S	A	V	D	G	R	T	E	H	Q	I	L	H	N	L	R	Q
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	V	I	R	A	L	E	I	I	K	L	T	G	S	P	Y	N	L	V	X	I	G	L	T	X	E	R	D	V	L	Y	D	R	I	N	R	R	V	D	Q	X	V	E	E
Template Known Secondary structure																		S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions