 |
Job Description | P77265 | Confidence | 89.89% | Date | Thu Jan 5 12:26:59 GMT 2012 |
Rank | 438 | Aligned Residues | 30 |
% Identity | 30% | Template | c3eihB_ |
PDB info |
PDB header:protein transport | Chain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; |
PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
|
Resolution | 3.25 Å |
|
  |   |
358 | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | K | P | G | Q | M | L | G | I | C | G | P | T | G | S | G | K | S | T | L | L | S | L | I | Q | R | H | F | D |
Query Conservation |   |
  |
|   |   |
|   |   |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|   |
Template Sequence |   |
N | R | K | P | T | S | G | I | L | L | Y | G | P | P | G | T | G | K | S | Y | L | A | K | A | V | A | T | E | A | N |
Template Known Secondary structure |   |
T |
|
|
|
|
|  |  |  |  |  |
| S | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|