Return to main results Retrieve Phyre Job Id

Job DescriptionP77265
Confidence89.89%DateThu Jan 5 12:26:59 GMT 2012
Rank438Aligned Residues30
% Identity30%Templatec3eihB_
PDB info PDB header:protein transportChain: B: PDB Molecule:vacuolar protein sorting-associated protein 4; PDBTitle: crystal structure of s.cerevisiae vps4 in the presence of atpgammas
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.......
Predicted Secondary structure 






















Query SS confidence 





























Query Sequence  ALKPGQMLGICGPTGSGKSTLLSLIQRHFD
Query Conservation   
  
    
 
 








 

 
   
Alig confidence 





























Template Conservation         


 







 

 


  
 
Template Sequence  NRKPTSGILLYGPPGTGKSYLAKAVATEAN
Template Known Secondary structure  T





STTS
TTT
Template Predicted Secondary structure 












Template SS confidence 





























   162.......170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions