Job Description P77265 Confidence 94.76% Date Thu Jan 5 12:26:59 GMT 2012 Rank 188 Aligned Residues 123 % Identity 15% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	G	Q	M	L	G	I	C	G	P	T	G	S	G	K	S	T	L	L	S	L	I	Q	R	H	F	D	V	S	E	G	D	I	R	F	H	D	I	P	L	T	K	L	Q	L	D	S	W	R	S	R	L	A	V	V	S	Q	T	P	F	L	F	S	D	T	V	A	N	N	I	A	L	G	C	P	N	A	T	Q
Query Conservation
Alig confidence																														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	P	Y	V	I	M	F	V	G	F	N	G	S	G	K	T	T	T	I	A	K	L	A	N	W	L	K	.	N	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	V	V	I	A	A	S	D	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	A	I
Template Known Secondary structure			S										T	T	S	S														.		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.																			.	.	.	.	.	.	.	.	160	.	.															.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		Q	E	I	E	H	V	A	R	L	A	S	V	H	D	D	I	L	R	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	M	L	S	G	G	Q	K	Q	R	I	S	I	A	R	A	L	L	V	N	A	E	I	L	I	L	D	D	A	L	.	S	A	V	D	G	R	T	E	H	Q	I	L	H	N	L	R	Q	W
Query Conservation																																																															.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																									.	.														.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		E	Q	L	E	E	H	A	K	R	I	G	.	.	.	.	.	.	.	.	.	.	.	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	.	.	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N	R	N	L	M	D	E	M	K	K	I	A	R	V	T
Template Known Secondary structure											T	T	.	.	.	.	.	.	.	.	.	.	.							S	T	T																.	.			T		S								S	S			S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.												.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		519	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	G	R	T	V	I	I	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	N	L	V	I	F	V	G	D
Template Known Secondary structure				S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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