Job Description P77265 Confidence 96.33% Date Thu Jan 5 12:26:59 GMT 2012 Rank 115 Aligned Residues 187 % Identity 19% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	A	L	K	P	G	Q	M	L	G	I	C	G	P	T	G	S	G	K	S	T	L	L	S	L	I	Q	R	H	F	D	V	S	E	G	D	I	R	F	H	D	I	P	L	T	K	L	Q	L	D	S	W	R	S	R	L	A	V	V	S	Q	T	P	F	L	F	S	D	T	V	A	N	N	I	A	L	G	C	P
Query Conservation
Alig confidence																																														.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	.	.	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	.	.	.	.	.	.	.	.	.	.	.	C	S	Q	P
Template Known Secondary structure		S	S	S			T	T	S							S	T	T	S	S														T	T	T								S	S	.	.												T			G	G	G			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1053	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.			.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.												.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.																													.	.	.	.	.	.	.	.	460	.	.	.																								.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	A	T	Q	Q	E	I	E	H	V	A	R	L	A	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	D	I	L	R	L	P	Q	G	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	G	G	N	A	L	K	F	Y	A	S	V	R	L
Template Known Secondary structure		S														T	T	S	S									G	G	G											T	T																T	T	T											T	T						S
Template Predicted Secondary structure
Template SS confidence
		1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.			.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		E	V	G	E	R	G	V	M	L	S	G	G	Q	K	Q	R	I	S	I	A	R	A	L	L	V	N	A	.	.	E	I	L	I	L	D	D	A	L	S	A	V	D	G	R	T	E	H	Q	I	L	H	N	L	R	Q	W	G	Q	G	R	T	V	I	I	S	A	H	R	L	S	A	L	T	E	A	S	E	I	I	V
Query Conservation																													.	.
Alig confidence																													.	.											.																	.	.	.
Template Conservation																																									.																	.	.	.
Template Sequence		D	I	R	R	I	G	A	V	K	E	G	E	N	V	V	G	S	E	T	R	V	K	V	V	K	N	K	I	A	A	P	F	K	Q	A	E	F	Q	I	.	L	Y	G	E	G	I	N	F	Y	G	E	L	V	D	L	G	.	.	.	V	K	E	K	L	I	E	K	A	G	A	W	Y	S	Y	K	G	E	K	I	G
Template Known Secondary structure												T	T															S	S	S		T	T								.		T	T	T													.	.	.			T	T	S	S				T	T					T	T
Template Predicted Secondary structure																																									.																	.	.	.
Template SS confidence
		1224	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.		.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.				.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.
								543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	M	Q	H	G	H	I	A	Q	R	G	N	H	D	V	L	A	Q
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		Q	G	K	A	N	A	T	A	W	L	K	D	N	P	E	T	A	K	E	I	E	K	K
Template Known Secondary structure												T	T	S
Template Predicted Secondary structure
Template SS confidence
		1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions