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Job DescriptionP77265
Confidence99.97%DateThu Jan 5 12:26:59 GMT 2012
Rank58Aligned Residues222
% Identity20%Templatec3bk7A_
PDB info PDB header:hydrolyase/translationChain: A: PDB Molecule:abc transporter atp-binding protein; PDBTitle: structure of the complete abce1/rnaase-l inhibitor protein2 from pyrococcus abysii
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   316...320.........330.........340.........350.........360.........370.........380.........390.....
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Query Sequence  AEAPVVNDGSEPVPEGRGELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRF
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Template Sequence  YEIRFTKLSERVDVERETLVEYPRLVKDYGSFK. . . LEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEW
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   325....330.........340.........350....... ..360.........370.........380.........390.........400.
 
   396...400.........410........ .420.........430..... ....440.........450.........460.........470..
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Query Sequence  HDIPLTKLQLDSWRSRLAVVSQT. PFLFSDTVANNIALGCP. . NATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVM
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Template Sequence  DLT. . . . . . . . . . . . . VAYKPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDR. . . . . . . . . . . NVED
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   402.. .....410.........420.........430.........440.........450... ....
 
   473......480.........490.........500.........510.........520 .........530...... ...540.... ...
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Query Sequence  LSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQWGQ. . GRTVIISAHRLSALTE. ASEIIVMQ. . HGH
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Template Sequence  LSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGR
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   458.460.........470.........480.........490.........500.........510.........520.........530.......
 
   548.550.........560....
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Query Sequence  IAQRGNHDVLAQQSGWY
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Template Sequence  HGRALPPMGMREGMNRF
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   538.540.........550....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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