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Job DescriptionP77265
Confidence100.00%DateThu Jan 5 12:26:59 GMT 2012
Rank26Aligned Residues211
% Identity28%Templatec2yyzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar abc transporter, atp-binding protein; PDBTitle: crystal structure of sugar abc transporter, atp-binding protein
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   335....340.........350.........360.........370.........380.........390.........400.........410....
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Query Sequence  LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAV
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Template Sequence  IRVVNLKKYF. . GKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPKY. . REVGM
Template Known Secondary structure  ..TT
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Query Sequence  VSQTPFLF. SDTVANNIALGCPNAT. . . . . . QQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARAL
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Template Sequence  VFQNYALYPHMTVFENIAFPLRARRISKDEVEKRVVEIARKLLIDNLLDRKPT. . . . . . . . . . . QLSGGQQQRVALARAL
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Query Sequence  LVNAEILILDDALSAVDGRTEHQILHNLRQWGQ. . GRTVIISAHRLSAL. TEASEIIVMQHGHIAQRGNHDVLAQQ
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Template Sequence  VKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDS
Template Known Secondary structure  TT

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   149150.........160.........170.........180.........190.........200.........210.........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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