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Job DescriptionP77265
Confidence100.00%DateThu Jan 5 12:26:59 GMT 2012
Rank28Aligned Residues219
% Identity26%Templatec1z47B_
PDB info PDB header:ligand binding proteinChain: B: PDB Molecule:putative abc-transporter atp-binding protein; PDBTitle: structure of the atpase subunit cysa of the putative2 sulfate atp-binding cassette (abc) transporter from3 alicyclobacillus acidocaldarius
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   334.....340.........350.........360.........370.........380.........390.........400.........410...
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Query Sequence  ELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLA
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Template Sequence  TIEFVGVEKIYPGG. ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQ. . KRNVG
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   14.....20....... ..30.........40.........50.........60.........70.........80..... ....90
 
   414.....420.... .....430.........440.........450.........460.........470.........480.........490..
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Query Sequence  VVSQTPFLFSD. TVANNIALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAE
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Template Sequence  LVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRF. . . . . MRLESYANRFPHELSGGQQQRVALARALAPRPQ
Template Known Secondary structure  TT



TTS
TTGGGTT

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GGGTTS
GGGS
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   91........100.........110.........120.........130.. .......140.........150.........160.....
 
   493......500.........510.........520 .........530.... .....540.........550.........560
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Query Sequence  ILILDDALSAVDGRTEHQILHNLRQWGQ. . GRTVIISAHRLSAL. TEASEIIVMQHGHIAQRGNHDVLAQQ
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Template Sequence  VLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEK
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   166...170.........180.........190.........200.........210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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