Job Description P0A720 Confidence 99.53% Date Thu Jan 5 11:04:32 GMT 2012 Rank 81 Aligned Residues 163 % Identity 17% Template c3trfB_ PDB info PDB header:transferase Chain: B: PDB Molecule:shikimate kinase; PDBTitle: structure of a shikimate kinase (arok) from coxiella burnetii Resolution 2.60 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	I	E	G	L	E	G	A	G	K	T	T	A	R	N	V	V	V	E	T	L	E	Q	L	G	I	R	D	M	V	F	T	R	E	P	G	G	T	Q	L	A	E	K	L	R	S	L	V	L	D	I	K	S	V	G	D	E	V	I	T	D	K	A	E	V	L	M	F	Y	A	A	R	V	Q	L	V	E	T	V
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	L	I	G	L	M	G	A	G	K	T	S	V	G	S	Q	L	A	K	L	T	K	R	I	L	Y	D	S	D	K	E	I	E	K	R	T	G	A	D	I	A	W	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	E	G	E	A	G	F	R	R	R	E	R	E
Template Known Secondary structure							S	T	T	S	S											T	T																T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																						.	.	.	.	.	.	.	60	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		I	K	P	A	L	A	N	G	T	W	V	I	G	D	R	H	D	L	S	T	Q	A	Y	Q	G	G	G	R	G	I	D	Q	H	M	L	A	T	L	R	D	A	V	L	G	D	F	R	P	D	L	T	L	Y	L	D	V	T	P	E	V	G	L	K	R	A	R	A	R	G	E	L	D	.	.	.	R	I	E	Q	E
Query Conservation																																																																										.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	E	A	L	C	K	L	D	N	I	I	L	A	T	G	G	G	V	V	L	D	E	K	N	R	Q	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	T	G	V	V	I	Y	L	T	A	S	I	D	T	Q	L	K	R	I	G	Q	K	G	E	M	R	R	P	L	F	I	K	N	N
Template Known Secondary structure									S	S	S							G	G	G	G	G	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								T	T		S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.																	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	D	F	F	N	R	T	R	A	R	Y	L	E	L	A	A	Q	D	K	S	I	H	T	I	D	A	T	Q	P	L	E	A	V	M	D	A	I	R	T	T	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	E	K	L	Q	Q	L	N	E	I	R	K	P	L	Y	Q	A	M	A	D	L	V	Y	P	T	D	D	L	N	P	R	Q	L	A	T	Q	I	L	V	D	I	K
Template Known Secondary structure																						S						T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions