Job Description P0A720 Confidence 99.69% Date Thu Jan 5 11:04:32 GMT 2012 Rank 44 Aligned Residues 174 % Identity 17% Template c3nwjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:atsk2; PDBTitle: crystal structure of shikimate kinase from arabidopsis thaliana2 (atsk2) Resolution 2.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	S	K	Y	I	V	I	E	G	L	E	G	A	G	K	T	T	A	R	N	V	V	V	E	T	L	E	Q	L	G	I	R	D	M	V	F	T	R	E	P	G	G	T	Q	L	A	E	K	L	R	S	L	V	L	D	I	K	S	V	G	D	E	V	I	T	D	K	A	E	V	L	M	F	Y	A	A	R	V	Q
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	G	R	S	M	Y	L	V	G	M	M	G	S	G	K	T	T	V	G	K	I	M	A	R	S	L	G	Y	T	F	F	D	C	D	T	L	I	E	Q	A	M	K	G	T	S	V	A	E	I	F	E	H	F	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	F	R	E	K
Template Known Secondary structure			T	T								S	T	T	S														T															T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																			.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	T	V	I	K	P	A	L	A	N	G	T	W	V	I	G	D	R	H	D	L	S	T	Q	A	Y	Q	G	G	G	R	G	I	D	Q	H	M	L	A	T	L	R	D	A	V	L	G	D	F	R	P	D	L	T	L	Y	L	D	V	T	P	E	V	G	L	K	R	A	R	A	R	G	E	L	D	R	I	E
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		E	T	E	A	L	K	K	L	S	L	M	Y	H	Q	V	V	V	S	T	G	G	G	.	.	.	.	.	.	.	.	.	.	A	V	I	R	P	I	N	W	K	Y	M	.	.	.	.	.	.	.	.	H	K	G	I	S	I	W	L	D	V	P	L	E	A	L	A	H	R	I	T	Y	T	A	A	L	N	R	L	S
Template Known Secondary structure															S							G	G	.	.	.	.	.	.	.	.	.	.	G	G	S	S								.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.											180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
					161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	E	S	F	D	F	F	N	R	T	R	A	R	Y	L	E	L	A	A	Q	D	K	S	I	H	T	I	D	A	T	Q	P	L	E	A	V	M	D	A	I	R	T	T	V	T	H	W	V	K	E
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		T	I	W	D	A	R	G	E	A	Y	T	K	A	S	A	R	V	S	L	E	N	I	T	L	K	L	G	Y	R	S	V	S	D	L	T	P	A	E	I	A	I	E	A	F	E	Q	V	Q	S	Y	L	E	K
Template Known Secondary structure												T	T	S	S													T		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions