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Job DescriptionP0A720
Confidence99.72%DateThu Jan 5 11:04:32 GMT 2012
Rank41Aligned Residues179
% Identity18%Templatec3akyA_
PDB info PDB header:adenylate kinaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: stability, activity and structure of adenylate kinase2 mutants
Resolution2.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40. ........50.........60.........70........
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Query Sequence  MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREP. . GGTQLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAAR
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Template Sequence  IR. . . MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNP.
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TTSS

TT
TTT




G.
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   5. ...10.........20.........30.........40.........50.........60.........70.........80
 
   7980.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  VQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARG. . . .
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Template Sequence  . . . . . . . . . . . . ACKNGFILDGFPRTI. . . . . . . . . . . PQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPA
Template Known Secondary structure  ............GGGS
S


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   81........90..... ....100.........110.........120.........130.......
 
   155....160.........170.........180.........190.........200....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ELDRIEQESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTV
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Template Sequence  SGRSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADFLNKL
Template Known Secondary structure  T

TTTB

SSTTB
GGG

B
B

TT
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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   205.
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Query Sequence  TH
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Template Sequence  GK
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   218.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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