Return to main results Retrieve Phyre Job Id

Job DescriptionP0A720
Confidence99.89%DateThu Jan 5 11:04:32 GMT 2012
Rank10Aligned Residues194
% Identity25%Templatec2wwiC_
PDB info PDB header:transferaseChain: C: PDB Molecule:thymidilate kinase, putative; PDBTitle: plasmodium falciparum thymidylate kinase in complex with2 aztmp and adp
Resolution2.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  RSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQL
Query Conservation 
  

 
 
  







  
   
    
      
                                          
Alig confidence 









































































......
Template Conservation 
   
 
 
  





    
   
      
                                         ......
Template Sequence  KGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENSMSNETIHLLFSANRWE. . . . . .
Template Known Secondary structure 
S
STTSSTTT

SS
TTSTTTSS


T......
Template Predicted Secondary structure 
























......
Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  VETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQ
Query Conservation                   
                                       
         
   
        
Alig confidence 






































...



































..
Template Conservation                

 
                     ...               
         
   
      ..
Template Sequence  HMNEIKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKTWC. . . MNPDQGLIKPDVVFYLNVPPNYAQNRDYGEEIYEKV. .
Template Known Secondary structure  TT


S


...TTTTTSB

S

TTTGGG

TTSSTT

..
Template Predicted Secondary structure 









...













..
Template SS confidence 















































































   81........90.........100.........110......... 120.........130.........140.........150.....
 
   162.......170.........180.........190.........200.........210
Predicted Secondary structure 







Query SS confidence 
















































Query Sequence  ESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE
Query Conservation                           

     


   
   
   
  
Alig confidence  ...

















.


























Template Conservation  ...                  .   

   
 


   
   
  
   
Template Sequence  . . . ETQKKIYETYKHFAHEDY. WINIDATRKIEDIHNDIVKEVTKVEPE
Template Known Secondary structure  ...GGGTSSSTT.TTS





B
Template Predicted Secondary structure  ...



.




Template SS confidence 
















































   157..160.........170.... .....180.........190.........200.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions