Job Description P0A720 Confidence 97.37% Date Thu Jan 5 11:04:32 GMT 2012 Rank 269 Aligned Residues 155 % Identity 15% Template c1vyuB_ PDB info PDB header:ion transport Chain: B: PDB Molecule:calcium channel beta-3 subunit; PDBTitle: beta3 subunit of voltage-gated ca2+-channel Resolution 2.3 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.								.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		M	R	S	K	Y	I	V	I	E	G	L	E	G	A	G	.	.	.	.	.	.	.	K	T	T	A	R	N	V	V	V	E	T	L	E	Q	L	G	I	R	D	M	V	F	T	R	E	P	G	G	T	Q	L	A	E	K	L	R	S	L	V	L	D	I	K	S	V	G	D	E	V	I	T	D	K	A	E	V	L	M
Query Conservation																	.	.	.	.	.	.	.
Alig confidence					.	.											.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	P	.	.	V	V	L	V	G	P	S	L	K	G	Y	E	V	T	D	X	X	Q	K	A	L	F	D	F	L	K	H	R	F	D	G	R	I	S	I	T	R	V	T	A	D	L	S	L	A	K	S	S	I	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S			.	.						S	S		T	T	S																		T	T	T	S								S		G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	A	A	R	V	Q	L	V	E	T	V	I	K	P	A	L	A	N	G	T	W	V	I	G	D	R	H	D	L	S	T	Q	A	Y	Q	G	G	G	R	G	I	D	Q	H	M	L	A	T	L	R	D	A	V	L	G	D	F	R	P	D	L	T	L	Y	L	D	V	T	P	E	V	G	L	K	R	A	R	A	R
Query Conservation
Alig confidence		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	V	Q	S	E	I	E	R	I	F	E	L	A	K	S	L	Q	L	V	V	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	T	I	N	H	P	A	Q	L	A	K	T	S	L	A	P	I	I	V	F	V	K	V	S	S	P	K	V	L	Q	R	L	I	R	S	R
Template Known Secondary structure		.	.	.	.	.													T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T			S	T					T	S	T	T										S												T
Template Predicted Secondary structure		.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270																		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		154	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	E	L	D	R	I	E	.	Q	E	S	F	D	F	F	N	R	T	R	A	R	Y	L	E	L	A	A	Q	D	K	S	I	H	T	I	D	A	T	Q	P	L	E	A	V	M	D	A	I	R	T	T	V	T	H	W	V	K
Query Conservation									.
Alig confidence									.																				.	.	.	.	.							.
Template Conservation																													.	.	.	.	.							.
Template Sequence		G	K	S	Q	X	K	H	L	T	V	Q	X	X	A	Y	D	K	L	V	Q	C	P	P	E	S	F	D	.	.	.	.	.	V	I	L	D	E	N	.	Q	L	D	D	A	C	E	H	L	A	E	Y	L	E	V	Y	W	R
Template Known Secondary structure							T	T	T	T	T											S		G	G	G		S	.	.	.	.	.						S	.
Template Predicted Secondary structure																													.	.	.	.	.							.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions