Job Description P0A720 Confidence 99.40% Date Thu Jan 5 11:04:32 GMT 2012 Rank 101 Aligned Residues 171 % Identity 14% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	S	K	Y	I	V	I	E	G	L	E	G	A	G	K	T	T	A	R	N	V	V	V	E	T	L	E	Q	L	G	I	R	D	M	V	F	T	R	E	P	G	G	T	Q	L	A	E	K	L	R	S	L	V	L	D	I	K	S	V	G	D	E	V	I	T	D	K	A	E	V	L	M	F	Y	A	A	R	V	Q
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		F	F	A	K	T	V	A	I	L	G	G	E	S	S	G	K	S	V	L	V	N	K	L	A	A	V	F	N	T	T	S	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	G	R	E	F	V	F	E	K	L	G	G	D	E	Q	A	M	Q	Y	S	.	.	.	.	D	Y	P	Q	X	A	L	G
Template Known Secondary structure		G	T										T	T	S													T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T							S	S	S	S		T	T	S	S		T	T	.	.	.	.	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.															.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	T	V	I	K	P	A	L	A	N	G	T	W	V	I	G	D	R	H	D	L	S	T	Q	A	Y	Q	G	G	G	R	G	I	D	Q	H	M	L	A	T	L	R	D	A	V	L	G	D	F	R	P	D	L	T	L	Y	L	D	V	T	P	E	V	G	L	K	R	A	R	A	R	G	E	L	D	R	I	E
Query Conservation
Alig confidence																																																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	Q	R	Y	I	D	Y	A	V	R	H	S	H	K	I	A	F	I	D	T	D	F	I	T	T	Q	A	F	C	I	Q	Y	E	G	K	A	H	P	F	L	D	S	X	I	K	E	Y	.	.	.	.	P	F	D	V	T	I	L	L	K	N	N	T	E	Q	K	Q	R	Q	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														S	S					S	S														S													S	.	.	.	.			S													S			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	S	F	D	F	F	N	R	T	R	A	R	Y	L	E	L	A	A	Q	D	K	S	I	H	T	I	D	A	T	Q	P	L	E	A	V	M	D	A	I	R	T	T	V	T	H	W	V	K	E	L	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	Q	F	Q	Q	L	L	K	K	L	L	D	K	Y	K	V	P	Y	I	E	I	E	S	P	S	Y	L	D	R	Y	N	Q	V	K	A	V	I	E	K	V	L	N	E	E	E
Template Known Secondary structure		.	.	.	.	.	.	.	.												G	G	G									S	S																T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions