Return to main results Retrieve Phyre Job Id

Job DescriptionP07464
Confidence99.95%DateThu Jan 5 11:00:20 GMT 2012
Rank9Aligned Residues138
% Identity29%Templated1mr7a_
SCOP infoSingle-stranded left-handed beta-helix Trimeric LpxA-like enzymes Galactoside acetyltransferase-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   55....60.........70.........80.........90.........100.........110. ......
Predicted Secondary structure 



























.................




Query SS confidence 
























































. . . . . . . . . . . . . . . . .





Query Sequence  FATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLS. . . . . . . . . . . . . . . . . VTGHPV
Query Conservation     

    
        
 

 

    
     
     
 

    
   
 
 .................      
Alig confidence 
















.

















..


















.................





Template Conservation   
    

 

  
 
 .          

     
..
    

    
   
 
                        
Template Sequence  ILEKLENVEVGEYSYYD. SKNGETFDKQILYHYPIL. . NDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWE
Template Known Secondary structure  TTSTT
TT
.
SSS

GGGGS

GGG..



SS

TT

GGG



SS



GGGG
TTGG
Template Predicted Secondary structure 









.





..

























Template SS confidence 















































































   23......30......... 40.........50....... ..60.........70.........80.........90.........
 
   118.120.........130.........140.........150.........160.........170.........180... ......190.....
Predicted Secondary structure 









































.

Query SS confidence 

































































.











Query Sequence  HHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIR. EINDRDKHYYFK
Query Conservation                
 

    

  
 
  

 

   







  


      
 





.            
Alig confidence 

































































.











Template Conservation                
 


 
 

 

 
  

 

 














   
  
 


 

 

    
     
Template Sequence  KHMPKLDQLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLD
Template Known Secondary structure  GG


GGGS





SS

TT

TT

TT

TT

S
B
TTTTSS
Template Predicted Secondary structure 











































Template SS confidence 














































































   100.........110.........120.........130.........140.........150.........160.........170........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions