Return to main results Retrieve Phyre Job Id

Job DescriptionP07464
Confidence9.78%DateThu Jan 5 11:00:20 GMT 2012
Rank60Aligned Residues26
% Identity27%Templated1ex4a1
SCOP infoSH3-like barrel DNA-binding domain of retroviral integrase DNA-binding domain of retroviral integrase
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170.........180....
Predicted Secondary structure 











Query SS confidence 

























Query Sequence  GAGSIVTKDIPPNVVAAGVPCRVIRE
Query Conservation 





  


      
 





 
Alig confidence 

























Template Conservation 







   














Template Sequence  GEGAVVIQDNSDIKVVPRRKAKIIRD
Template Known Secondary structure 
SS
SS
GGG


Template Predicted Secondary structure 











Template SS confidence 

























   245....250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions