Job Description P07464 Confidence 99.95% Date Thu Jan 5 11:00:20 GMT 2012 Rank 15 Aligned Residues 142 % Identity 23% Template c2iu9C_ PDB info PDB header:transferase Chain: C: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine PDBTitle: chlamydia trachomatis lpxd with 100mm udpglcnac (complex ii) Resolution 3.1 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		A	T	V	G	E	N	A	W	V	E	P	P	V	Y	F	S	Y	G	S	N	I	H	I	G	R	N	F	Y	A	N	F	N	L	T	I	V	D	D	Y	T	V	T	I	G	D	N	V	L	I	A	P	N	V	T	L	S	V	T	G	H	P	V	H	H	E	L	R	K	N	G	E	M	Y	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																	.	.																							.	.																																	.	.	.	.	.	.	.
Template Conservation																	.	.																							.	.
Template Sequence		A	I	I	E	D	H	V	C	I	E	P	Y	A	V	V	.	.	C	Q	H	A	H	V	G	S	A	C	H	I	G	S	G	S	V	I	G	A	Y	S	.	.	T	V	G	E	H	S	Y	I	H	P	R	V	V	I	R	E	R	V	S	I	G	K	R	V	I	I	Q	P	G	A	V	I	G	S	C	G	F	G	Y
Template Known Secondary structure						T	T					T	T				.	.		T	T					T	T					T	T					T	T		.	.				T	T					S	S					S	S					T	T					T	T								S
Template Predicted Secondary structure																	.	.																							.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
																																																																									129	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	P	I	T	I	G	N	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	S	A	F	G	Q	H	K	H	L	K	H	L	G	K	V	I	I	E	D	D	V	E	I	G	A	N	T	T	I	D	R	G	R	F	K	H	S	V	V	R	E	G	S	K	I	D	N	L	V	Q	I	A	H	Q	V	E	V	G	Q	H	S	M	I	V	A	Q	A	G	I	A	G	S	T	K	I	G	N	H
Template Known Secondary structure					S	S	S															T	T					T	T							S	S	S						T	T					T	T					T	T					T	T					T	T					T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	W	I	G	S	H	V	V	I	N	P	G	V	T	I	G	D	N	S	V	I	G	A	G	S	I	V	T	K	D	I	P	P	N	V	V	A	A	G	V	P	C	R	V	I	R	E	.	.	.	.	.	.	.	.	.	.	I	N	D	R	D	K	H	Y	Y	F	K	D	Y	K	V	E	S
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	I	G	G	Q	A	G	I	T	G	H	I	C	I	A	D	H	V	I	M	M	A	Q	T	G	V	T	K	S	I	T	S	P	G	I	Y	G	G	A	P	A	R	P	Y	Q	E	I	H	R	Q	V	A	K	V	R	N	L	P	R	L	E	E	R	I	A	A	L	E	K	L	V	Q	K
Template Known Secondary structure						T	T					S	S					T	T					T	T					S		B		S						T	T	T	T														T	T												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions