Job Description P0AEW4 Confidence 99.95% Date Thu Jan 5 11:24:25 GMT 2012 Rank 9 Aligned Residues 238 % Identity 17% Template c3t1iC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:double-strand break repair protein mre11a; PDBTitle: crystal structure of human mre11: understanding tumorigenic mutations Resolution 3.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	G	E	A	R	V	R	I	L	Q	I	T	D	T	H	L	F	A	Q	K	H	E	A	L	L	G	V	N	T	W	E	S	Y	Q	A	V	L	E	A	I	R	P	H	Q	H	E	F	D	L	I	V	A	T	G	D	L	A	Q	D	Q	S	S	A	A	Y	Q	H	F	A	E	G	I	A	S	F	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																																																																													.	.	.	.	.
Template Conservation
Template Sequence		D	D	E	N	T	F	K	I	L	V	A	T	D	I	H	L	G	F	X	E	K	D	A	V	R	G	N	D	T	F	V	T	L	D	E	I	L	R	L	A	Q	E	N	E	V	D	F	I	L	L	G	G	D	L	F	H	E	N	K	P	S	R	K	T	L	H	T	C	L	E	L	L	R	K	Y	C	X	G	D	R
Template Known Secondary structure			G	G	G												B	T	T	T	S	S		T	T	T	T	T																T	T		S						S		S	B	S	S	S	S																		B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																	85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.												.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	P	C	V	W	L	P	G	N	H	D	F	Q	P	A	M	Y	S	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	D	A	G	I	S	P	A	K	R	V	F	I	G	E	Q	W	Q	I	L	L	L	D	S	Q	V	F	G	V	P	H	G	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	Q	F	E	I	L	S	D	Q	S	N	L	N	I	S	I	P	V	F	S	I	H	G	N	H	D	D	P	T	G	A	D	A	L	C	A	L	D	I	L	S	C	A	G	F	V	N	H	F	G	R	S	X	S	V	E	K	I	D	I	S	P	V	L	L	Q	K	G	S	T	K	I	A	L	Y	G	L	G	S
Template Known Secondary structure									S	S						B		S								S	S	S			B	T	T	T	T	B										T	S										S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150									.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure														.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.
Query Sequence		L	S	E	F	Q	L	E	W	L	E	R	K	.	.	.	.	.	.	.	.	L	A	D	A	P	E	R	H	T	L	L	L	L	H	H	H	P	L	P	A	G	C	S	W	L	D	Q	H	S	L	R	N	A	G	E	L	D	T	V	L	A	K	F	P	H	V	K	Y	L	L	C	G	H	I	H	Q	E	L	D	L
Query Conservation														.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	D	E	R	L	Y	R	X	F	V	N	K	K	V	T	X	L	R	P	K	E	D	E	N	S	W	F	N	L	F	V	I	H	Q	N	R	S	K	H	G	S	T	N	F	I	P	E	Q	F	L	.	.	.	.	.	.	.	.	.	.	.	D	D	F	I	D	L	V	I	W	G	H	E	H	E	C	K	I	A
Template Known Secondary structure													T	T								S	S		G	G	G									S			S		S	S	S	S	S	S			G	G	G	S	.	.	.	.	.	.	.	.	.	.	.		T	T								S			S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.												.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
						211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																												.
Query SS confidence		.	.	.	.																												.
Query Sequence		.	.	.	.	D	W	N	G	R	R	L	L	A	T	P	S	T	C	V	Q	F	K	P	H	C	S	N	F	T	L	D	.	T	I	A	P	G	W	R	T	L	E	L	H	A	D	G	T	L	T	T	E	V	H	R	L	A	D	T	R
Query Conservation		.	.	.	.																												.
Alig confidence		.	.	.	.														.	.	.	.	.	.									.													.
Template Conservation																			.	.	.	.	.	.																						.
Template Sequence		P	T	K	N	E	Q	Q	L	F	Y	I	S	Q	P	G	S	S	.	.	.	.	.	.	V	V	T	S	L	S	P	G	E	A	V	K	K	H	V	G	L	L	R	I	K	.	G	R	K	X	N	X	H	K	I	P	L	H	T	V	R
Template Known Secondary structure						T	T	T										S	.	.	.	.	.	.	S			S							S											.	T	T										S	S	S
Template Predicted Secondary structure																			.	.	.	.	.	.																						.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.							270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions