Job Description P0AEW4 Confidence 99.95% Date Thu Jan 5 11:24:25 GMT 2012 Rank 11 Aligned Residues 238 % Identity 16% Template c3qg5D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair Resolution 3.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.
Predicted Secondary structure																			.	.	.	.																																																					.	.	.
Query SS confidence																			.	.	.	.																																																					.	.	.
Query Sequence		R	I	L	Q	I	T	D	T	H	L	F	A	Q	K	H	E	A	.	.	.	.	L	L	G	V	N	T	W	E	S	Y	Q	A	V	L	E	A	I	R	P	H	Q	H	E	F	D	L	I	V	A	T	G	D	L	A	Q	D	Q	S	S	A	A	Y	Q	H	F	A	E	G	I	A	S	F	.	.	.	R	A	P	C
Query Conservation																			.	.	.	.																																																					.	.	.
Alig confidence																			.	.	.	.																																																					.	.	.
Template Conservation
Template Sequence		K	I	L	H	T	S	D	W	H	L	G	V	T	S	W	T	S	S	R	P	V	D	R	R	E	E	L	K	K	A	L	D	K	V	V	E	E	A	E	K	R	E	V	D	L	I	L	L	T	G	D	L	L	H	S	R	N	N	P	S	V	V	A	L	H	D	L	L	D	Y	L	K	R	X	X	R	T	A	P	V
Template Known Secondary structure											B	T					T	T	T	S				T																		T	T		S								S	B	S		S	S																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	W	L	P	G	N	H	D	F	Q	P	A	M	Y	S	A	L	Q	D	A	G	I	S	P	A	K	R	V	F	I	G	E	Q	W	Q	I	L	L	L	D	S	Q	V	F	G	V	P	H	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	E	F	Q	L	E	W	L	E	R	K	L	A
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	L	P	G	N	H	D	W	K	G	L	K	L	F	G	N	F	V	T	S	I	S	S	D	I	T	F	V	X	S	F	E	P	V	D	V	E	A	K	R	G	Q	K	V	R	I	L	P	F	P	Y	P	D	E	S	E	A	L	R	K	N	E	G	D	F	R	F	F	L	E	S	R	L	N	K	L	Y	E	E
Template Known Secondary structure							S			S	T	T													S	S						S	S	S							T	T														S									T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	P	E	R	H	T	L	L	L	L	H	H	H	P	L	P	A	G	C	S	W	L	D	Q	H	S	L	R	N	A	G	E	L	D	T	V	L	A	K	F	P	H	V	K	Y	L	L	C	G	H	I	H	Q	E	L	D	L	D	W	N	G	R	R	L	L	A	T	P	S	T	C	V	Q	F	K	P	H	C	S
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.																						.												.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.																						.												.	.	.	.	.	.
Template Sequence		A	L	K	K	E	D	F	A	I	F	X	G	H	F	T	V	E	G	L	A	G	Y	R	E	I	I	I	N	R	A	.	.	.	.	.	.	.	.	L	I	P	S	V	V	D	Y	A	A	L	G	H	I	H	S	F	R	E	I	Q	.	K	Q	P	L	T	I	Y	P	G	S	L	.	.	.	.	.	.	I	R	I
Template Known Secondary structure				T		S	S								S			T	T	S										G	G	.	.	.	.	.	.	.	.	G	S		S	S		S						S		S	S						.		T	T								S	.	.	.	.	.	.	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.																						.												.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.									.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.							230	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	T	L	D	T	I	A	P	G	W	R	T	L	E	L	H	A	D	G	T	L	T	T	E	V	H	R	L	A	D	T	R	F	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	F	G	E	E	A	D	E	K	G	A	V	F	V	E	L	K	R	G	E	P	P	R	Y	E	R	I	D	A	S	P	L	P	L	K	T
Template Known Secondary structure		S	G	G	G	T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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