Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEW4
Confidence99.27%DateThu Jan 5 11:24:25 GMT 2012
Rank40Aligned Residues211
% Identity15%Templatec3ivdA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nucleotidase; PDBTitle: putative 5'-nucleotidase (c4898) from escherichia coli in2 complex with uridine
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30......... 40.........50......... 60.........70.........80....
Predicted Secondary structure 



















......




.









Query SS confidence 



























. . . . . .



















.
























Query Sequence  EARVRILQITDTHLFAQKHEALLGVNTW. . . . . . ESYQAVLEAIRPHQHEFDLI. VATGDLAQDQSSAAYQHFAEGIASF
Query Conservation     


  


 


             ......  
      
         
. 

                  
   
Alig confidence 



























......



















.
























Template Conservation     
 

 
 
 

                 

 
 
   
   
      
 

 

   

  
    
      

 
Template Sequence  AKDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIXNT
Template Known Secondary structure 



TT

S
B

TTSGGGTS
B


SS
S

SSSSTTTTTT
Template Predicted Secondary structure 




































Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   85....90.........100.... .....110.........120.........130. ....
Predicted Secondary structure 








....................













.........



Query SS confidence 



















. . . . . . . . . . . . . . . . . . . .


























. . . . . . . . .



Query Sequence  RAPCVWLPGNHDFQPAMYSA. . . . . . . . . . . . . . . . . . . . LQDAGISPAKRVFIGEQWQILLLDSQV. . . . . . . . . FGVP
Query Conservation        
 



        ....................                           .........    
Alig confidence 



















....................


























.........



Template Conservation   
 
    





 
   
           
 


             
 
    
 





                
Template Sequence  XPFDAVTIGNHEFDHGWDNTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSAATR
Template Known Secondary structure  S

S


GGGGTT
TT
SS
B


STTSS
BSSS
STT
S
GGGS
Template Predicted Secondary structure 














































Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   136...140.........150...... ...160.........170.........180.........190.........200..... ....210.
Predicted Secondary structure 







..



























..



Query SS confidence 




















. .
















































. .





Query Sequence  HGELSEFQLEWLERKLADAPE. . RHTLLLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIH. . QELDLD
Query Conservation   
     
   
   
     ..   

  

                        
     
  
  

 
..      
Alig confidence 




















..
















































..





Template Conservation        
           

   
 



 
 
                             

 




 
        
Template Sequence  VGIEARDEIKWLQRYIDELKGKVDLTVALIHEGVPARQSSXGGTDVRRALDKDIQTASQVKGLDILITGHAHVGTPEPIK
Template Known Secondary structure  TT

TTT
S
SS




SSGGGSS




SS

SS



SS
Template Predicted Secondary structure 




































Template SS confidence 















































































   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   212.......220..
Predicted Secondary structure 




Query SS confidence 










Query Sequence  WNGRRLLATPS
Query Conservation    
       
Alig confidence 










Template Conservation       

  
 
Template Sequence  VGNTLILSTDS
Template Known Secondary structure  TT


S
Template Predicted Secondary structure 





Template SS confidence 










   262.......270..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions