 |
Job Description | P0AEW4 | Confidence | 5.93% | Date | Thu Jan 5 11:24:25 GMT 2012 |
Rank | 81 | Aligned Residues | 73 |
% Identity | 11% | Template | c3h02F_ |
PDB info |
PDB header:lyase | Chain: F: PDB Molecule:naphthoate synthase; |
PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium.
|
Resolution | 2.15 Å |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . | . | . |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | H | L | F | A | Q | K | H | E | A | L | L | G | V | N | T | W | E | S | Y | Q | A | V | L | E | A | I | R | P | H | Q | H | E | F | D | L | I | V | . |
. |
. |
A | T | G | D | L | A | Q | D | Q | S | S | A | A | Y | Q | H | F | A | E | G | I | A | S | F | R | A | P | C | V | W | L | P | G | N | H |
Query Conservation |   |
  |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|   |
Template Sequence |   |
I | T | I | N | R | P | Q | V | R | N | A | F | R | P | L | T | V | K | E | X | I | Q | A | L | A | D | A | R | Y | D | D | N | V | G | V | I | I | L | T | G | E | G | D | K | A | F | C | A | G | G | D | H | L | N | V | L | D | F | Q | R | Q | I | R | T | C | P | K | P | V | V | A | X | V | A | G | Y |
Template Known Secondary structure |   |
 |  |  |
|
| G | G | G | T | T |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  | S | S | S | S |  |  |  |
|
| B |
|
|
| T |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |
| S |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|