Job Description P0AEW4 Confidence 7.89% Date Thu Jan 5 11:24:25 GMT 2012 Rank 74 Aligned Residues 71 % Identity 8% Template c3ew8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:histone deacetylase 8; PDBTitle: crystal structure analysis of human hdac8 d101l variant Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		G	V	N	T	W	E	S	Y	Q	A	V	L	E	A	I	R	P	H	Q	H	E	F	D	L	I	V	A	T	G	D	L	A	Q	D	Q	.	.	.	.	.	.	.	.	S	S	A	A	Y	Q	H	F	A	E	G	I	A	S	F	R	A	P	C	V	W	L	P	G	N	H	D	F	Q	P	A	M	Y	S	A	L
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	K	Y	Y	Q	I	C	E	S	V	L	K	E	V	Y	Q	A	F	N	P	K	A	V	V	L	Q	L	G	A	D	T	I	A	G	D	P	M	C	S	F	N	M	T	P	V	G	I	G	K	C	L	K	Y	I	L	Q	W	Q	L	A	T	L	I	L	G	G	G	G	Y	N	L	A	N	T	A	R	C	W
Template Known Secondary structure																							S								S	T	T	B	T	T		T	T					B														T	T													S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions