Job Description P0AEW4 Confidence 97.20% Date Thu Jan 5 11:24:25 GMT 2012 Rank 53 Aligned Residues 182 % Identity 20% Template c3e0jG_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna polymerase subunit delta-2; PDBTitle: x-ray structure of the complex of regulatory subunits of2 human dna polymerase delta Resolution 3.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.																				.	.	.	.	.
Query Sequence		R	I	L	Q	I	T	D	T	H	L	F	A	Q	K	H	E	A	L	L	G	V	N	T	W	E	S	Y	Q	A	V	L	.	.	.	.	.	.	.	.	E	A	I	R	P	H	Q	H	E	F	D	L	I	V	A	T	G	D	L	.	.	.	.	.	A	Q	D	Q	S	S	A	A	Y	Q	H	F	A	E	G	I	A
Query Conservation																																	.	.	.	.	.	.	.	.																				.	.	.	.	.
Alig confidence																				.	.	.											.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		F	V	L	L	V	S	G	L	G	L	G	G	G	G	G	E	S	L	.	.	.	L	G	T	Q	L	L	V	D	V	V	T	G	Q	L	G	D	E	G	E	Q	C	S	A	A	H	V	S	R	V	I	L	A	G	N	L	L	S	H	L	T	K	K	T	Q	A	A	S	V	E	A	V	K	M	L	D	E	I	L	L
Template Known Secondary structure											B	T	S	S						.	.	.												T	S	S	S									T	T								S		S	B
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		83	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.
Predicted Secondary structure				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query SS confidence				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query Sequence		S	F	.	.	R	A	P	C	V	W	L	P	G	N	H	D	F	Q	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	M	Y	S	A	L	Q	D	A	G	I	S	P	A	K	R	V	F	I	G	E	Q	W	Q	I	L	L	L	D	S	Q	V	F	G	V	P	H	G	E	L	S	.	E	F	Q	L	E	W
Query Conservation				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Alig confidence				.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		Q	L	S	A	S	V	P	V	D	V	M	P	G	E	F	D	P	T	N	Y	T	L	P	Q	Q	P	L	H	P	C	M	F	P	L	A	T	A	Y	S	T	L	Q	L	V	T	N	P	Y	Q	A	T	I	D	G	V	R	F	L	G	T	S	G	Q	N	V	S	D	I	F	R	Y	S	S	M	E	D	H	L	E	I
Template Known Secondary structure							S								T	T	S	S	S		S	S	S	S						G	G	G						T	S	T	T						S	S						T	T							S	S										S
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		L	E	R	K	L	A	D	A	P	E	R	H	T	L	L	L	L	H	H	H	P	L	P	A	G	C	S	W	L	D	Q	H	S	L	R	N	A	G	E	L	D	T	V	L	A	K	F	P	H	V	K	Y	L	L	C	G	H	I	H	Q	E	L	D	L	D	W	N	G	.	.	.	.	.	R	R	L	L	A	T	P
Query Conservation																																																																						.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.										.									.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.										.									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	W	T	L	R	V	R	.	.	.	.	.	.	.	.	.	H	I	S	P	T	A	P	D	T	.	K	T	D	P	F	I	F	P	.	.	.	.	.	.	.	.	.	.	.	.	E	C	P	H	V	Y	F	C	G	N	T	P	S	F	G	S	K	I	I	R	G	P	E	D	Q	T	V	L	L	V	T	V	P
Template Known Secondary structure								B	T	.	.	.	.	.	.	.	.	.		S		T	T	S				.				T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	.	S			S								S	S									S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.										.									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.										.	.	.	.	.	.	.	380	.		.	.	.	.	.	.	.	.													390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		222
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		430

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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