Job Description P0AEW4 Confidence 99.97% Date Thu Jan 5 11:24:25 GMT 2012 Rank 7 Aligned Residues 250 % Identity 13% Template c3av0A_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna double-strand break repair protein mre11; PDBTitle: crystal structure of mre11-rad50 bound to atp s Resolution 3.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.
Predicted Secondary structure															.																																																											.	.	.
Query SS confidence															.																																																											.	.	.
Query Sequence		R	V	R	I	L	Q	I	T	D	T	H	L	F	.	A	Q	K	H	E	A	L	L	G	V	N	T	W	E	S	Y	Q	A	V	L	E	A	I	R	P	H	Q	H	E	F	D	L	I	V	A	T	G	D	L	A	Q	D	Q	S	S	A	A	Y	Q	H	F	A	E	G	I	A	S	F	.	.	.	R	A	P	C	V
Query Conservation															.																																																											.	.	.
Alig confidence															.																																																											.	.	.
Template Conservation
Template Sequence		H	M	M	F	V	H	I	A	D	N	H	L	G	Y	R	Q	Y	N	L	D	D	R	E	K	D	I	Y	D	S	F	K	L	C	I	K	K	I	L	E	I	K	P	D	V	V	L	H	S	G	D	L	F	N	D	L	R	P	P	V	K	A	L	R	I	A	M	Q	A	F	K	K	L	H	E	N	N	I	K	V	Y
Template Known Secondary structure													B	T			G	G	G																					T	T			S						S		S	B	S	S	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		W	L	P	G	N	H	D	F	Q	P	A	M	Y	S	A	L	Q	D	A	G	I	S	P	A	K	R	V	F	I	G	E	Q	W	Q	I	L	L	.	.	.	L	D	S	Q	V	F	G	V	P	H	G	E	L	S	E	F	Q	L	E	W	L	E	R	K	L	A	D	A	P	E	R	H	T	L	L	L	L	H	H	H
Query Conservation																																							.	.	.
Alig confidence																																							.	.	.
Template Conservation
Template Sequence		I	V	A	G	N	H	E	M	P	R	R	L	G	E	E	S	P	L	A	L	L	K	D	Y	V	K	I	L	D	G	K	D	V	I	N	V	N	G	E	E	I	F	I	C	G	T	Y	Y	H	K	K	S	K	R	E	E	M	L	D	K	L	K	N	F	E	S	E	A	K	N	Y	K	K	K	I	L	M	L	H	Q
Template Known Secondary structure						G	G	G	S		S	S	T	T	S			G	G	G	G	G	T	T	T					S								T	T													S	T	T																	T		S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	P	A	G	C	S	W	L	D	Q	H	S	L	R	N	A	G	E	L	D	T	V	L	A	K	F	P	H	V	K	Y	L	L	C	G	H	I	H	Q	E	L	D	L	D	W	N	G	R	R	L	L	A	T	P	S	T	C	V	Q	F	K	P	H	C	S	N	F	T	L	D	T	I	A	P	G	W	R	T	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.																																															.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.																																															.	.
Template Sequence		G	I	N	P	Y	I	P	L	D	Y	E	L	E	.	.	.	.	.	.	.	.	.	.	H	F	D	L	P	K	F	S	Y	Y	A	L	G	H	I	H	K	R	I	L	E	R	F	N	D	G	I	L	A	Y	S	G	S	T	E	I	I	Y	R	N	E	Y	E	D	Y	K	.	.	K	E	G	K	G	F	Y	L	V
Template Known Secondary structure				T	T	T	S	S	S	S		S	S		.	.	.	.	.	.	.	.	.	.	G	G	G	S				S						S			S							S	S	S								S	S			S	G	G	G	T					.	.				S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																																															.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.											.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		E	L	H	A	D	G	T	L	T	T	E	V	H	R	L	A	D	T	R	F	Q	.	P	D	T	A	S	E	G	Y
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		D	F	S	G	N	D	L	D	I	S	D	I	E	K	I	D	I	E	C	R	E	F	V	E	V	N	I	K	D	K
Template Known Secondary structure					S	S	S			G	G	G																		S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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