Job Description P0AEW4 Confidence 99.76% Date Thu Jan 5 11:24:25 GMT 2012 Rank 33 Aligned Residues 155 % Identity 21% Template c2kknA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution nmr structure of themotoga maritima protein tm1076:2 northeast structural genomics consortium target vt57 Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		V	R	I	L	Q	I	T	D	T	H	L	F	A	Q	K	H	E	A	L	L	G	V	N	T	W	E	S	Y	Q	A	V	L	E	A	I	R	P	.	H	Q	H	E	F	D	L	I	V	A	T	G	D	L	A	Q	D	Q	S	S	A	A	Y	Q	H	F	A	E	G	I	A	S	F	R	A	P	C	V	W	L	P	G
Query Conservation																																							.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																.															.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template Sequence		K	R	F	L	L	I	S	D	S	H	.	.	.	.	.	.	.	.	.	.	.	.	V	P	V	R	M	A	S	L	P	D	E	I	L	N	S	L	K	E	Y	D	G	V	I	G	L	G	D	Y	V	D	.	.	.	.	.	.	.	.	.	L	D	T	V	I	L	L	E	K	F	S	K	E	F	Y	G	V	H	G
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	B	T	T	T	T										G	G	G	G		S					S	S		B	S		.	.	.	.	.	.	.	.	.											T	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.													.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	D	F	Q	P	A	M	Y	S	A	L	Q	D	A	G	I	S	P	A	K	R	V	F	I	G	E	Q	W	Q	I	L	L	L	D	S	Q	V	F	G	V	P	H	G	E	L	S	E	F	Q	L	E	W	L	E	R	K	L	A	D	A	P	E	R	H	T	L	L	L	L	H	H	H	P	L	P	A	G	C	S
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		N	M	D	Y	P	D	V	K	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	F	S	K	V	L	L	V	E	G	V	T	I	G	M	C	H	G	W	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S		G	G	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S							T	T								S		.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70																																												.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	D	Q	H	S	L	R	N	A	G	E	L	D	T	V	L	A	K	F	P	H	V	K	Y	L	L	C	G	H	I	H	Q	E	L	D	L	D	W	N	G	R	R	L	L	A	T	P	S	T	C	V	Q	F	K	P	H	C	S	N	F	T	L	D	T	I	A	P	G	W	R	T	L	E	L	H	A	D	G	T
Query Conservation
Alig confidence		.	.	.	.																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation		.	.	.	.																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		.	.	.	.	G	A	P	W	D	L	K	D	R	L	L	K	V	F	N	E	.	K	P	Q	V	I	L	F	G	H	T	H	E	P	E	D	T	V	K	A	G	V	R	F	L	N	P	G	S	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	Y	A	V	L	E	L	.	D	G	G	E
Template Known Secondary structure		.	.	.	.														S	S	S	.			S						S		S	S							T	T									T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								.		T	T
Template Predicted Secondary structure		.	.	.	.																	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
						91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																.	.	140	.	.	.	.	.		.	.	.	.
		254	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	E	V	H	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	F	E	L	K	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions