 |
Job Description | P07001 | Confidence | 95.18% | Date | Thu Jan 5 10:59:54 GMT 2012 |
Rank | 243 | Aligned Residues | 84 |
% Identity | 17% | Template | d5ldha1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.70 |
|
 |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | P | P | A | K | V | M | V | I | G | A | G | V | A | G | L | A | A | I | G | A | A | N | S | L | G | A | . |
. |
I | V | R | A | F | D | T | R | P | E | V | K | E | Q | V | Q | S | M | G | A | E | F | L | E | L | D | F | K | E | E | A | G | S | G | D | G | Y | A | K | V | M | S | D | A | F | I | K | A | E | M |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|
| . | . |   |
|   |   |   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
T | I | P | D | N | K | I | T | V | V | G | V | G | Q | V | G | M | A | C | A | I | S | I | L | G | K | S | L | T | D | E | L | A | L | V | D | V | L | E | D | K | L | K | G | E | M | M | D | L | Q | H | G | S | L | F | L | Q | T | P | K | I | V | A | N | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
|
| S | S |
|  |  |  | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S | S |  |  |  |
|
| S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |
|
|
|
|  |  |
|
| S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | F | A | A | Q | A | K | E | V | D | I | I | V | T | T | A | L | I | P | G | K | P |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
Template Sequence |   |
. |
. |
D | Y | S | V | T | A | N | S | K | I | V | V | V | T | A | G | V | R | Q | Q | E |
Template Known Secondary structure |   |
. | . | S | S | S | G | G | G | S |
| S |  |  |  |  |
|
| T | T |
|
|
| S |
Template Predicted Secondary structure |   |
. | . |
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|