 |
Job Description | P07001 | Confidence | 94.78% | Date | Thu Jan 5 10:59:54 GMT 2012 |
Rank | 274 | Aligned Residues | 94 |
% Identity | 14% | Template | d1vlva2 |
SCOP info | ATC-like
| Aspartate/ornithine carbamoyltransferase
| Aspartate/ornithine carbamoyltransferase
|
Resolution | 2.25 |
|
 |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | |
. | |
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  | . |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | P | A | K | V | M | V | I | G | . |
A | . |
G | V | A | G | L | A | A | I | G | A | A | N | S | L | G | A | I | V | R | A | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | T | R | P | E | V | K | E | Q | V | Q | S | M | G | A | E | F | L | E | L | D | F | K | E | E | A | G | S | G | D | G | Y | A | K | V | M | S |
Query Conservation |   |
|   |
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|
|   |
|
|   |
|
|
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
L | K | G | V | K | V | V | F | M | G | D | T | R | N | N | V | A | T | S | L | M | I | A | C | A | K | M | G | M | N | F | V | A | C | G | P | E | E | L | K | P | R | S | D | V | F | K | R | C | Q | E | I | V | K | E | T | D | G | S | V | S | F | T | S | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  | S |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
| G | G | G |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
232 | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | |
. | . | . | . | 280 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |
| . |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
D | A | F | I | K | A | E | M | E | L | F | A | A | Q | A | K | E | V | D | I | I | V | T | T | A | L | I | P | . |
G | K | P | A | P | K | L | I | T | R | E | M | V | D | S | M | . |
K | A | G | S | V | I |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|
| . |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |
| . |
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . |   |   |
|
|   |   |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | E | E | A | L | A | G | A | D | V | V | Y | T | D | V | W | A | R | M | A | L | L | K | P | Y | Q | V | N | E | R | V | M | E | M | T | G | K | S | E | T | I | F |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
|
|
|  |  |  |  | G | G | G |
| B |
|  |  |  |  |  | T | T |
|
| T | T |
|  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|