Return to main results Retrieve Phyre Job Id

Job DescriptionP07001
Confidence98.46%DateThu Jan 5 10:59:54 GMT 2012
Rank36Aligned Residues135
% Identity26%Templated1gpja2
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190 .........200... ......210.....
Predicted Secondary structure 






















.

.





Query SS confidence 




















































.












.











Query Sequence  GYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAAIGAANSLGAI. VRAFDTRPEVKEQ. VQSMGAEFLELD
Query Conservation 

 


 

  
     
  



 
 













 

 

  


 .
   


  
 
 .





 

  
Alig confidence 














...........


























.












.











Template Conservation     
   
   
   ...........  
 






  
      
       
 
  
    
  
            
Template Sequence  GSAAVELAERELGSL. . . . . . . . . . . HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFD
Template Known Secondary structure  S

...........TT
S



S
SST


GG
Template Predicted Secondary structure 



...........


















Template SS confidence 















































































   151........160..... ....170.........180.........190.........200.........210.........
 
   216...220.........230.........240.........250.........260.........270..... ....280.........
Predicted Secondary structure 























......






Query SS confidence 



























































. . . . . .













Query Sequence  FKEEAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSM. . . . . . KAGSVIVDLAAQNG
Query Conservation    
      


   
 
        
   
  




 





  

 


 


  
......









 
 
Alig confidence 
.........................














...




.









......













Template Conservation   .........................
      




 

... 
   .

    
               



 


Template Sequence  E. . . . . . . . . . . . . . . . . . . . . . . . . LVDHLARSDVVVSAT. . . AAPHP. VIHVDDVREALRKRDRRSPILIIDIANPRD
Template Known Secondary structure  G.........................T
S

...SSSS
.
B

SS




SS
S
Template Predicted Secondary structure  .........................





...




.















Template SS confidence 















































































   220 .........230..... ....240 .........250.........260.........270
 
   290.........300.........310.........
Predicted Secondary structure 











Query SS confidence 





























Query Sequence  GNCEYTVPGEIFTTENGVKVIGYTDLPGRL
Query Conservation 

 
 
     
    

 
 

 



 
Alig confidence  .......






















Template Conservation  .......
   
     
    



    
Template Sequence  . . . . . . . VEEGVENIEDVEVRTIDDLRVIA
Template Known Secondary structure  .......B
TTGGGSTT
Template Predicted Secondary structure  .......




Template SS confidence 





























   271........280.........290...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions