Job Description P07001 Confidence 98.51% Date Thu Jan 5 10:59:54 GMT 2012 Rank 33 Aligned Residues 189 % Identity 13% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	V	W	Q	S	E	I	I	L	K	V	N	A	P	L	D	D	E	I	A	L	L	N	P	G	T	T	L	V	S	F	I	W	P	A	Q	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	S	V	P	R	I	S	R	A	Q	S	L	D	A	L	S	S	M	A	N	I	A	G	Y
Query Conservation
Alig confidence																										.															.																											.	.
Template Conservation																										.															.																											.	.
Template Sequence		E	K	L	I	G	E	A	H	I	L	M	A	E	P	A	R	A	K	P	L	L	A	K	A	.	N	K	L	S	W	F	Q	S	T	Y	A	G	V	D	.	V	L	L	D	A	R	C	R	R	D	Y	Q	L	T	N	V	R	G	I	F	G	P	L	M	S	E	.	.	Y	V	F	G	H	L	L	S	L	M	R	Q
Template Known Secondary structure					G	G	G		S										G	G	G	G	G	G		.	T	T							S	S	S			G	.	G	G	S		T	T	S			S	S							S									.	.											T	T
Template Predicted Secondary structure																										.															.																											.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	I	V	E	A	A	H	E	F	G	R	F	F	T	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	F	K	E	E
Query Conservation
Alig confidence																	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	Q	S	.	.	.	H	P	Y	Q	G	L	K	G	R	T	L	L	I	L	G	T	G	S	I	G	Q	H	I	A	H	T	G	K	H	F	G	M	K	V	L	G	V	S	R	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	R
Template Known Secondary structure											T	T					.	.	.						S	T	T									S													T	T								S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.																			.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	S	G	D	G	Y	A	K	V	M	S	D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		A	G	F	D	Q	V	Y	Q	L	P	A	.	.	.	.	.	.	.	.	.	.	.	L	N	K	M	L	A	Q	A	D	V	I	V	S	V	L	P	A	.	T	R	E	T	H	H	L	F	T	A	S	R	F	E	H	C	K	P	G	A	I	L	F	N	V	G
Template Known Secondary structure		T	T		S					G	G	G	.	.	.	.	.	.	.	.	.	.	.							T		S									.		S	S	S	T	T	S	B		T	T	T	T	T		S		T	T							S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.												.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions