Job Description P07001 Confidence 99.93% Date Thu Jan 5 10:59:54 GMT 2012 Rank 12 Aligned Residues 265 % Identity 21% Template c3d4oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase subunit a; PDBTitle: crystal structure of dipicolinate synthase subunit a (np_243269.1)2 from bacillus halodurans at 2.10 a resolution Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	I	G	I	P	R	E	R	L	T	N	E	T	R	V	A	A	T	P	K	T	V	E	Q	L	L	K	L	G	F	T	V	A	V	E	S	G	A	G	Q	L	A	S	F	D	D	K	A	F	V	Q	A	G	A	E	I	V	E	G	N	S	V	W	Q	S	E	I	I	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.							.	.	.																	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.							.	.	.																	.	.	.	.	.	.	.
Template Sequence		K	H	V	V	I	I	G	.	.	.	.	G	D	A	R	Q	L	.	.	.	E	I	I	R	K	L	S	T	F	D	A	K	I	S	L	V	.	.	.	.	.	.	.	G	F	D	Q	L	D	F	I	G	V	T	K	X	R	I	D	E	V	D	W	N	T	V	D	A	I	L	L	P	I	S	G	T	N	E	A	G
Template Known Secondary structure									.	.	.	.	B						.	.	.									T	T							.	.	.	.	.	.	.	S		T	T				T	T						G	G	G			G	G	G		S						T	T				T	T
Template Predicted Secondary structure									.	.	.	.							.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.					.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
										71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	K	V	N	A	P	L	D	D	E	I	A	L	L	N	P	G	T	T	L	V	S	F	I	W	P	A	Q	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	S	V	P	R	I	S	R	A	Q	S	L	D	A	L	S	S	M	A	N	I	A	G	Y	R	A	I
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	D	T	I	F	S	N	E	S	I	V	L	T	E	E	X	I	E	K	T	P	N	H	C	V	V	Y	S	G	I	S	N	T	Y	L	N	Q	C	X	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	N	R	T	L	V	K	L	X	E	R	D	D	I	A	I	Y	N	S	I
Template Known Secondary structure		B			B	S	S		S				B								T	S		T	T						S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T						G	G	G
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	A	H	E	F	G	R	F	F	T	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	F	K	E	E	A	G	S
Query Conservation
Alig confidence																		.	.	.																																																								.	.	.	.	.	.
Template Conservation																		.	.	.																																																								.	.	.	.	.	.
Template Sequence		P	T	A	E	G	T	I	X	X	A	I	Q	H	T	D	F	.	.	.	T	I	H	G	A	N	V	A	V	L	G	L	G	R	V	G	X	S	V	A	R	K	F	A	A	L	G	A	K	V	K	V	G	A	R	E	S	D	L	L	A	R	I	A	E	X	G	X	E	P	F	H	I	S	K	.	.	.	.	.	.
Template Known Secondary structure																S	S	.	.	.		S	T	T									S													T	T								S	S										T	T	S					G	G	G	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.																																																								.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	G	Y	A	K	V	M	S	D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A	A	Q	N	G	G	N	C	E	Y	T	V	P	G	E	I	F	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	E	L	R	D	V	D	V	C	I	N	T	I	.	.	.	.	.	.	P	A	L	V	V	T	A	N	V	L	A	E	X	P	S	H	T	F	V	I	D	L	A	S	K	P	G	G	.	.	.	.	.	.	T	D	F	R	Y	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T		S							.	.	.	.	.	.	S	S			B								S		T	T							S	S	T	T		S	.	.	.	.	.	.	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																													.	.	.	.	.	.
Template SS confidence
																					206	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		T	E	N	G	V	K	V	I	G	Y	T	D	L	P	G	R	L	.	P	T	Q	S	S	Q	L	Y	G	T	N	L	V	N	L	L	K	L
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		E	K	R	G	I	K	A	L	L	V	P	G	L	P	G	I	V	A	P	K	T	A	G	R	I	L	A	D	V	L	V	K	L	L	A	E
Template Known Secondary structure					T																															T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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