Job Description P07001 Confidence 94.23% Date Thu Jan 5 10:59:54 GMT 2012 Rank 324 Aligned Residues 131 % Identity 29% Template c3aogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form) Resolution 2.10 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.												.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	A	I	V	E	A	A	H	E	F	G	R	F	F	T	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	.	.	.	.	.	.	.	.	.	.	.	T	R	P	E	V	K	E	Q	V	Q	S	M
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	T	A	A	A	A	A	E	K	I	G	L	.	.	.	.	.	.	.	.	.	.	Q	V	E	G	A	R	V	A	I	Q	G	F	G	N	V	G	N	A	A	A	R	A	F	H	D	H	G	A	R	V	V	A	V	Q	D	H	T	G	T	V	Y	N	E	A	G	I	D	P	Y	D	L	L	R	H	V	Q	E
Template Known Secondary structure													T		.	.	.	.	.	.	.	.	.	.		S	T	T									S													T	T									S	S						T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.											.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	E	F	L	E	L	D	F	K	E	E	A	G	S	G	D	G	Y	A	K	V	M	S	D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A	A	Q
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		F	G	G	V	R	G	Y	P	K	A	E	P	L	P	A	A	D	F	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	V	E	F	L	V	P	A	A	L	.	.	.	.	.	.	E	K	Q	I	T	E	Q	N	A	W	R	I	R	A	R	I	V	A	.	.	.	.	.	.
Template Known Secondary structure		T	S	S	S	T	T		T	T	S									T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S						S	S	.	.	.	.	.	.	S	S		B		T	T	T	G	G	G				S				.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																				.	.	.	.	.	.	.	300	.	.	.							.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	G	N	C	E	Y	T	V	P	G	E	I	F	T	T	E	N	G	V	K	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	A	N	G	P	T	T	P	A	A	D	D	I	L	L	E	K	G	V	L	V	V
Template Known Secondary structure				S	S	S		B												T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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