Job Description P07001 Confidence 99.92% Date Thu Jan 5 10:59:54 GMT 2012 Rank 13 Aligned Residues 281 % Identity 20% Template c2rirA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dipicolinate synthase, a chain; PDBTitle: crystal structure of dipicolinate synthase, a chain, from bacillus2 subtilis Resolution 2.79 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		M	R	I	G	I	P	R	E	R	L	T	N	E	T	R	V	A	A	T	P	K	T	V	E	Q	L	L	K	L	G	F	T	V	A	V	E	S	G	A	G	Q	L	A	S	F	D	D	K	A	F	V	Q	A	G	A	E	I	V	E	.	.	G	N	S	V	W	Q	S	E	I	I	L	K	V	N	A	P	L	D	D
Query Conservation																																																													.	.
Alig confidence									.	.	.	.							.	.	.																.	.	.	.	.	.	.																		.	.																	.	.	.
Template Conservation									.	.	.	.							.	.	.																.	.	.	.	.	.	.																																				.	.	.
Template Sequence		L	K	I	A	V	I	G	.	.	.	.	G	D	A	R	Q	L	.	.	.	E	I	I	R	K	L	T	E	Q	Q	A	D	I	Y	L	.	.	.	.	.	.	.	V	G	F	D	Q	L	D	H	G	F	T	G	A	V	K	C	N	I	D	E	I	P	F	Q	Q	I	D	S	I	I	L	P	V	S	A	.	.	.
Template Known Secondary structure								S	.	.	.	.	B						.	.	.									T	T						.	.	.	.	.	.	.		S		T	T	S	S				T	T						G	G	G	S		G	G	G		S						S	S		.	.	.
Template Predicted Secondary structure									.	.	.	.							.	.	.																.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
		5	.	.	.	.	10	.					.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																					.	.																									.	.	.	.	.
Query SS confidence																					.	.																									.	.	.	.	.
Query Sequence		E	I	A	L	L	N	P	G	T	T	L	V	S	F	I	W	P	A	Q	.	.	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	S	V	P	R	I	.	.	.	.	.	S	R	A	Q	S	L	D	A	L	S	S	M	A	N	I	A	G	Y	R	A	I	V	E	A	A	H	E	F	G	R
Query Conservation																					.	.																									.	.	.	.	.
Alig confidence		.	.	.	.																.	.																									.	.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	T	T	G	E	G	V	V	S	T	V	F	S	N	E	E	V	V	L	K	Q	D	H	L	D	R	T	P	A	H	C	V	I	F	S	G	I	S	N	A	Y	L	E	N	I	A	A	Q	A	K	R	K	L	V	K	L	F	E	R	D	D	I	A	I	Y	N	S	I	P	T	V	E	G	T	I	X	L
Template Known Secondary structure		.	.	.	.			T	T	T				B	S	S		S	S											T	S		T	T						S	S												T	T						G	G	G	S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	T	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	F	K	E	E	A	G	S	G	D	G	Y	A	K	V	M	S
Query Conservation
Alig confidence									.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	Q	H	T	D	Y	.	.	.	T	I	H	G	S	Q	V	A	V	L	G	L	G	R	T	G	X	T	I	A	R	T	F	A	A	L	G	A	N	V	K	V	G	A	R	S	S	A	H	L	A	R	I	T	E	X	G	L	V	P	F	H	T	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T		S	S	.	.	.		S	T	T	S								S													T	T								S	S										T	T						G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A	A	Q	N	G	G	N	C	E	Y	T	V	P	G	E	I	F	T	T	E	N	G	V	K	V	I	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																													.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	L	K	E	H	V	K	D	I	D	I	C	I	N	T	I	.	.	.	.	.	.	P	S	X	I	L	N	Q	T	V	L	S	S	X	T	P	K	T	L	I	L	D	L	A	S	R	P	G	G	.	.	.	.	.	.	T	D	F	K	Y	A	E	K	Q	G	I	K	A	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.					S	T	T		S							.	.	.	.	.	.	S	S			B						T	T	S		T	T							S	S	T	T		S	.	.	.	.	.	.	B									T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.																													.	.	.	.	.	.
Template SS confidence
												206	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		312	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		Y	T	D	L	P	G	R	L	.	P	T	Q	S	S	Q	L	Y	G	T	N	L	V	N	L	L	K	L	L	C	K	E	K
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		A	P	G	L	P	G	I	V	A	P	K	T	A	G	Q	I	L	A	N	V	L	S	K	L	L	A	E	I	Q	A	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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