Job Description P07001 Confidence 98.92% Date Thu Jan 5 10:59:54 GMT 2012 Rank 18 Aligned Residues 214 % Identity 20% Template c2cukC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glycerate dehydrogenase/glyoxylate reductase; PDBTitle: crystal structure of tt0316 protein from thermus thermophilus hb8 Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		M	R	I	G	I	P	R	E	R	L	T	N	E	T	R	V	A	A	T	P	K	T	V	E	Q	L	L	K	L	G	F	T	V	A	V	E	S	G	A	G	Q	L	A	S	F	D	D	K	A	F	V	Q	A	G	A	E	I	V	E	G	N	S	V	W	Q	S	E	I	I	L	.	K	V	N	A	P	L	D	D	E
Query Conservation																																																																								.
Alig confidence										.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.										.
Template Conservation										.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	L	V	T	R	T	.	.	.	.	.	.	.	.	.	L	P	G	K	A	L	D	R	L	R	E	R	G	L	E	V	E	V	H	R	G	.	.	.	.	L	F	L	P	K	A	E	L	L	K	.	.	.	.	.	.	.	.	.	R	V	E	G	A	V	G	L	I	P	T	V	E	D	R	I	D	A	E
Template Known Secondary structure							S	S		.	.	.	.	.	.	.	.	.		S	S	S	T							T	T								S	.	.	.	.	S										.	.	.	.	.	.	.	.	.			T	T		S						T	T	S		B
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																						.	.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.										.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.					30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		I	A	L	L	N	P	G	T	T	L	V	S	F	I	W	P	A	Q	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	S	V	P	R	I	S	R	A	Q	S	L	D	A	L	S	S	M	A	N	I	A	G	Y	R	A	I	V	E	A	A	H	E	F	G	R	F	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	M	D	R	A	K	G	L	K	V	I	A	C	Y	S	V	G	V	D	H	V	D	L	E	A	A	R	E	R	G	I	R	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	P	G	V	L	T	E	A	T	A	D	L	T	L	A	L	L	L	A	V	A	R	R	V	V	E	G	A	A	Y	A
Template Known Secondary structure							S	S							S	S	S			T	T	B								T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T																	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.															.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
									153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	F	T	G	Q	I	T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	F	K	E	E	A	G	S	G	D	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																															.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	G	L	W	K	A	W	H	P	E	L	L	L	G	L	D	L	Q	G	L	T	L	G	L	V	G	M	G	R	I	G	Q	A	V	A	K	R	A	L	A	F	G	M	R	V	V	Y	H	A	R	T	P	.	.	.	.	.	.	K	P	L	P	Y	P	F	L	S	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T							T	T	T	T						T	T							S		S													T	T								S	S		.	.	.	.	.	.		S		S	S		B			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	K	V	M	S	D	A	F	I	K	A	E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	L	L	K	E	A	D	V	V	S	L	H	T	P	L	.	T	P	E	T	H	R	L	L	N	R	E	R	L	F	A	M	K	R	G	A	I	L	L	N	T	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S									.		T	T	T	T	T		B						T	T	S		T	T							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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