Job Description P07001 Confidence 98.45% Date Thu Jan 5 10:59:54 GMT 2012 Rank 37 Aligned Residues 231 % Identity 17% Template c1xdwA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad+-dependent (r)-2-hydroxyglutarate PDBTitle: nad+-dependent (r)-2-hydroxyglutarate dehydrogenase from2 acidaminococcus fermentans Resolution 1.98 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		M	R	I	G	I	P	R	E	R	L	T	N	E	T	R	V	A	A	T	P	K	T	V	E	Q	L	L	K	L	G	F	T	V	A	V	E	S	G	A	G	Q	L	A	S	F	D	D	K	A	F	V	Q	A	G	A	E	I	V	E	G	N	S	V	W	Q	S	E	.	I	I	L	K	V	N	A	P	L	D	D	E
Query Conservation																																																																					.
Alig confidence					.											.	.	.	.	.																					.	.	.	.	.										.	.	.	.	.	.	.	.	.						.
Template Conservation					.											.	.	.	.	.																					.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template Sequence		M	K	V	.	L	C	Y	G	V	R	D	V	E	L	.	.	.	.	.	P	I	F	E	A	C	N	K	E	F	G	Y	D	I	K	C	V	P	D	Y	.	.	.	.	.	L	N	T	K	E	T	A	E	M	.	.	.	.	.	.	.	.	.	A	A	G	F	D	A	V	I	L	R	G	N	C	F	A	N	K	Q
Template Known Secondary structure					.				S			T	T	T		.	.	.	.	.							G	G	G	T								S			.	.	.	.	.	S		S						T	.	.	.	.	.	.	.	.	.	T	T	T		S						T	T			B
Template Predicted Secondary structure					.											.	.	.	.	.																					.	.	.	.	.										.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.						.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.						.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		I	A	L	L	N	P	G	T	.	.	T	L	V	S	F	I	W	P	A	Q	N	P	E	L	M	Q	K	L	A	E	R	N	V	T	V	M	A	M	D	S	V	P	R	I	S	R	A	Q	S	L	D	A	L	S	S	M	A	N	I	A	G	Y	R	A	I	V	E	A	A	H	E	F	G	R	F	F	T	G	Q	I
Query Conservation										.	.
Alig confidence										.	.																																							.	.
Template Conservation																																																		.	.
Template Sequence		N	L	D	I	Y	K	K	L	G	V	K	Y	I	L	T	R	T	A	G	T	D	H	I	D	K	E	Y	A	K	E	L	G	F	P	M	A	F	V	P	R	Y	S	P	N	A	I	A	E	.	.	L	A	V	T	Q	A	M	M	L	L	R	H	T	A	Y	T	T	S	R	T	A	K	K	N	F	K	V	D	A	F
Template Known Secondary structure										T							S	S	S			T	T	B								T	T																	.	.											T	T									T	T	T						S	T
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	A	G	K	V	P	P	A	K	V	M	V	I	G	A	G	V	A	G	L	A	A	I	G	A	A	N	S	L	G	A	I	V	R	A	F	D	T	R	P	E	V	K	E	Q	V	Q	S	M	G	A	E	F	L	E	L	D	F	K	E	E	A	G	S	G	D	G	Y	A	K	V	M	S	D	A	F	I	K	A
Query Conservation
Alig confidence																																											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	F	S	K	E	V	R	N	C	T	V	G	V	V	G	L	G	R	I	G	R	V	A	A	Q	I	F	H	G	M	G	A	T	V	I	G	E	D	V	F	E	.	.	.	.	.	.	I	K	G	I	E	D	Y	C	T	Q	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T					G	G	G	S								S													T	T								S	S		.	.	.	.	.	.			S		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	E	L	F	A	A	Q	A	K	E	V	D	I	I	V	T	T	A	L	I	P	G	K	P	A	P	K	L	I	T	R	E	M	V	D	S	M	K	A	G	S	V	I	V	D	L	A
Query Conservation
Alig confidence		.	.	.	.																		.
Template Conservation		.	.	.	.																		.
Template Sequence		.	.	.	.	L	D	E	V	L	E	K	S	D	I	I	T	I	H	A	P	Y	.	I	K	E	N	G	A	V	V	T	R	D	F	L	K	K	M	K	D	G	A	I	L	V	N	C	A
Template Known Secondary structure		.	.	.	.									S									.		T	T	T			S	B							T	S		T	T							S
Template Predicted Secondary structure		.	.	.	.																		.
Template SS confidence
						192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions